DRSC/TRiP Functional Genomics Resources

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Protein Alignment shps and spr-5

DIOPT Version :10

Sequence 1:NP_651239.1 Gene:shps / 42892 FlyBaseID:FBgn0286199 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_493366.1 Gene:spr-5 / 173214 WormBaseID:WBGene00005010 Length:770 Species:Caenorhabditis elegans


Alignment Length:557 Identity:99/557 - (17%)
Similarity:183/557 - (32%) Gaps:177/557 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VLIVGGGLSGLASALKILAMES-TLKVRMIEASDALGGLM--------------GQNSTRLVDAA 63
            |:::|.|.:|:::|.:   :|| ...|.::||.:.:||.:              |....::.|:.
 Worm   137 VIVIGAGAAGISAATQ---LESFGFDVIVLEARNCIGGRIHSFKSKSGEIMETGGDTLRKIEDSP 198

  Fly    64 QQDMLALLTL----------------------IHLSPRRRRSISGSL----RRCWDLD------- 95
            ...:|..:..                      |||.....:|..|:|    .:|...|       
 Worm   199 MATLLHQVNFEEHGVFDFTSVFVEGRPLNEEKIHLFLDHYKSAHGALNYQAHQCEHRDDQGSFIS 263

  Fly    96 -----RGLTAMPAKFELGRYID------------------MLDLRMPKFRSK-RFNLRERVSNME 136
                 ..|.:|..:..|.:|.:                  |..|||....:: :....|...|:|
 Worm   264 RQQAYENLLSMCERGTLIKYYNFCKSLETVARAREHHFNQMKQLRMTALMAENQLKKMEEEGNLE 328

  Fly   137 Q-------------------------------------------HICHHLFFSKSRNFMLNLVQL 158
            |                                           ...|......:.||||...:.
 Worm   329 QDPVLRRSLKRDIATSLEKFEEVADAFETADNHWQRLNEHPQAKQYMHPGSEFATFNFMLGFEEY 393

  Fly   159 VCGVPANEVDYDVFMSVCSSCGGLKVLIDFYFTYPTSFYEISTQMLIENILEQLQFIKIILNCRA 223
            :.|....:|.:.     |.|....:..:....|  ....|:.||      |.:.:.:.|.|..|.
 Worm   394 LVGAQLEKVQFS-----CDSMQNKENGVAARLT--EGIAELLTQ------LSEKRKLDIRLKHRV 445

  Fly   224 VRLEH--FKN-YVQVTDDQGNKHTAQAA--ILAIPWNKVQKLHFEPRIPKVFLPRTTSRSGRKGR 283
            :.:::  |:: .::|..:.|:....:||  :..:|...::|..........|.|....:.....|
 Worm   446 LDIDYSGFEHVLLKVQRENGDIEEMKAAFVVSTLPIGVLKKTIIADERAPTFTPSLPDKKVEAIR 510

  Fly   284 QV----ISQFQLRYGKSVWTDLGYSGNFLSSQPMVS--GHECRMSS------FCGYV------LH 330
            .:    :::..|.:.:..||..|....|::..|.:.  |.....||      .|.|:      |.
 Worm   511 NIGCGSVNKCILEFDRVFWTANGGRNQFVTVSPNIKTRGSMNIWSSVPGSKVLCTYIVGEEAMLE 575

  Fly   331 LPEDQDEVLQDVVDLLAEHFGEEM-RQPLEC---QCFTDELNVAQH-----KPQTKPWHRVIWSS 386
            ||:  |.::|:.:..|.:.||... |.|:..   :...|||.....     :.:|..:..|:...
 Worm   576 LPD--DVIIQNAMINLQKAFGNNCPRAPISAHITRWHDDELAFGSGAFMSLRTETTSFDDVMEPL 638

  Fly   387 SSAVG------------TSYRSLMGGAVQSGFRAAVN 411
            .::.|            :||.|.:.||..||.|||.:
 Worm   639 KTSDGMSRVYFAGEHTCSSYTSTIQGAWMSGARAAAD 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shpsNP_651239.1 YobN 9..409 CDD:440844 97/553 (18%)
spr-5NP_493366.1 SWIRM 39..117 CDD:461307
Amino_oxidase 151..676 CDD:396255 94/543 (17%)
Blue background indicates that the domain is not in the aligned region.

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