DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shps and maob

DIOPT Version :9

Sequence 1:NP_651239.1 Gene:shps / 42892 FlyBaseID:FBgn0286199 Length:477 Species:Drosophila melanogaster
Sequence 2:XP_002932838.1 Gene:maob / 100494267 XenbaseID:XB-GENE-949917 Length:521 Species:Xenopus tropicalis


Alignment Length:554 Identity:108/554 - (19%)
Similarity:202/554 - (36%) Gaps:148/554 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DVLIVGGGLSGLASALKILAMESTLKVRMIEASDALGG------------------LMGQNSTRL 59
            ||:::|.|:|||.:| |:| :||...|.::||.|.:||                  .:|....|:
 Frog     6 DVIVIGAGISGLTAA-KLL-VESGQSVVVLEARDRVGGRTFTVRNDKVKYVDLGGAYVGPTQNRI 68

  Fly    60 VDAAQQ------DMLALLTLIH------------LSPRRRRSISGSLRRCWDLDRGLTAMPAKFE 106
            :..|::      .:..:..|||            ..|.|...:.......|              
 Frog    69 LRVAKEFGVETYKVNEVQRLIHHVKGKSYPFHGSFPPMRNPFVYLDYNNLW-------------- 119

  Fly   107 LGRYIDMLDLRMPK---FRSKRFNLRERVSNMEQHICHHLFFSKSRNFMLNLVQLVCGVPANEVD 168
              |.:|.:...:|.   :.:......:::: |::.|....:.:.::.|....|.:......:||.
 Frog   120 --RTMDEMGKEIPNEAPWMAPHAEEWDKIT-MKELIDKTCWTNAAKRFATLFVNVNVTSEPHEVS 181

  Fly   169 YDVFMSVCSSCGGLKVLIDFYFTYPTS-------FYEISTQMLIENILEQLQFIKIILNCRAVRL 226
            ...|:.....|||...:      :.||       |...|.| :.|.|.|.||. ::.|....|.:
 Frog   182 ALWFLWYVKQCGGTTRI------FSTSNGGQERKFIGGSGQ-ISEKIAEHLQG-RVKLQRPVVSI 238

  Fly   227 EHFKNYVQVTDDQGNKHTAQAAILAIPWNKVQKLHFEPRIPKVFLPRTTSRSGRKGRQVISQFQL 291
            :.....:.|......|:.|:..|.|:|.....|:||.|.:|    |.......|.....:.:..:
 Frog   239 DQTTENIIVETLNHEKYEAKYVISAMPPALCLKIHFNPELP----PLRNQLINRVPMGSVIKCMV 299

  Fly   292 RYGKSVWTDLGYSGNFL-------------SSQPMVSGHECRMSSFCGYVL--------HLPEDQ 335
            .|.::.|....|.|:.:             .::|     :..:....|::|        ||.:::
 Frog   300 YYKEAFWRKKDYCGSMIIEDEEAAIGLTLDDTKP-----DGTVPGIMGFILARKSRRLVHLTKEE 359

  Fly   336 DEVLQDVVDLLAEHFG-EEMRQPLE------CQ------CFTDELNVAQHKP---------QTKP 378
            .:  |.:.:|.|:..| ||...|:.      |:      |:|     |...|         ..:|
 Frog   360 RK--QKICELYAKVLGSEEALHPVHYEEKNWCEEQYSGGCYT-----AYFPPGILTQYGRVLREP 417

  Fly   379 WHRVIWSSSSAVGTSYRSLMGGAVQSGFRAAVNAVFVVR--PQVVSWKDMLVEQPK---NGQDVV 438
            ..|:.::.:. ..|.:...:.||:|:|.|||...:|.:.  |:...|   :.|.|.   .|..:.
 Frog   418 VGRIFFAGTE-TATEWSGYLEGAIQAGERAAREILFKMGKIPECDIW---MPEPPSVDIPGLPIT 478

  Fly   439 SA------GRIRGLLSRLNLYNVTFYSFFVIGLI 466
            :.      ..::|||..:. ::....|...:||:
 Frog   479 TTFWERNLPSVQGLLKLIG-FSTLLTSTAAVGLL 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shpsNP_651239.1 NADB_Rossmann 11..>53 CDD:304358 18/57 (32%)
Amino_oxidase 21..409 CDD:279874 90/476 (19%)
maobXP_002932838.1 YobN 5..452 CDD:224152 96/489 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1151887at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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