DRSC/TRiP Functional Genomics Resources

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Protein Alignment shps and Lao1

DIOPT Version :9

Sequence 1:NP_651239.1 Gene:shps / 42892 FlyBaseID:FBgn0286199 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_598653.3 Gene:Lao1 / 100470 MGIID:2140628 Length:523 Species:Mus musculus


Alignment Length:538 Identity:105/538 - (19%)
Similarity:170/538 - (31%) Gaps:212/538 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GTQTPELD--VLIVGGGLSGLASALKILAMESTLKVRMIEASDALGGLMGQNSTRLVDAAQQDML 68
            |..|..|.  |::||.|::||.:|..:  .::..:|.::|||:.:||                  
Mouse    50 GLHTSPLSKRVVVVGAGMAGLVAAKTL--QDAGHEVTILEASNHIGG------------------ 94

  Fly    69 ALLTLIHLSPRRRRSISGSLRRCWDLDRGLTAMPAKFEL-GRYIDMLDLRMPKF----------- 121
            .::||       |....|     |.|:.|...:|...:| ..|:..|.|::.||           
Mouse    95 RVVTL-------RNKEEG-----WYLELGPMRIPESHKLIHTYVQKLGLKLNKFHQYDSNTWYLL 147

  Fly   122 RSKRFNLRERVSNMEQHICHHLFFSKSRNFMLNLVQLVCGVP-----ANEVDYDVFMSV------ 175
            ..:|:...|.::|..                      :.|.|     .|:...|:|...      
Mouse   148 NGQRYRASEVMANPG----------------------ILGYPLRPSEKNKTVTDLFYQAITKIKP 190

  Fly   176 ---CSSCGGLKVLIDFYFTYPTSFY------------EISTQMLIEN------ILEQLQFIKII- 218
               .|:|   ..|:..|.:|.|..|            |:...::.||      :||.|:...|. 
Mouse   191 HRKTSNC---SQLLSLYDSYSTKAYLMKEGTLSKGAIEMIGDIMNENAGYYKSLLESLRIASIFS 252

  Fly   219 -----------------------------LNCRAVRLEHFKNYVQV---TDDQG---NKHTAQAA 248
                                         |..:..|:......|:|   ||...   :|.||..|
Mouse   253 KSDQFSEITGGFDQLPNGLSASLKPGTIRLGSKVERVVRDGPKVKVMYRTDGPTSALHKLTADYA 317

  Fly   249 ILAIPWNKVQKLHFEPRIPKVFLPRTTSRSGRKGRQVISQFQLRYGKSVWTDLGYSGNF-LSSQP 312
            |:.......:.:.|:|.:.:.......|.......:|:.....|:    |...|..|.: ::.:|
Mouse   318 IITASAKATRLITFQPPLSREKTHALRSVHYTSATKVVLVCNERF----WEQDGIRGGYSITDRP 378

  Fly   313 MVSGHECRMSSFCGYVLH-LPEDQDEVLQ--------------------DVV--DLLAEHF--GE 352
                     |.|..|..| ||..:..:|.                    |||  ||.|.|.  .|
Mouse   379 ---------SRFIYYPSHSLPGGKGVLLASFTVGDDSSFFAALKPNQVVDVVLDDLAAVHRIPKE 434

  Fly   353 EMRQ-------------PLECQCFTDELNVAQHKPQTKPWHRVIWSS--SSAVGTSY-------- 394
            |:::             ||....||          :..|:..|.:|.  |...|..|        
Mouse   435 ELKRMCPKSAIKHWSLDPLTIGAFT----------EFTPYQFVDYSKQLSQPEGRIYFAGEHTCL 489

  Fly   395 -RSLMGGAVQSGFRAAVN 411
             .|.:..|::||.||:.|
Mouse   490 PHSWIDTAIKSGIRASCN 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shpsNP_651239.1 NADB_Rossmann 11..>53 CDD:304358 14/43 (33%)
Amino_oxidase 21..409 CDD:279874 96/517 (19%)
Lao1NP_598653.3 NAD_binding_8 62..129 CDD:290186 22/98 (22%)
Amino_oxidase 67..508 CDD:279874 98/521 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839581
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1231
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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