DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and OCT5

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_178059.1 Gene:OCT5 / 844279 AraportID:AT1G79410 Length:515 Species:Arabidopsis thaliana


Alignment Length:455 Identity:110/455 - (24%)
Similarity:198/455 - (43%) Gaps:66/455 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 IPRSSNETKTCSSYVYDRSKYLNSAVTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSD-KL 155
            |||        |::.:|......|.::|::|.||.|.|.:...|.|.:|.::|.::...:.| .|
plant    88 IPR--------SAWDWDGGFKGKSVISEFDLECSSSFLRSLPSSTFYVGSIVGGVVLAMIPDGSL 144

  Fly   156 GRKPTFFASLVLQLIFGVLAAVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGV 220
            |||...|.|.....:.|:...::...:.|:..:.::|...|.....|.|:..|.:.:.:|..|.:
plant   145 GRKQLLFFSSFAMSLTGISIFLSSNIWIYSFLKFVIGFARSQTGTYALVLISERISTKWRPRATM 209

  Fly   221 AMQMFFSVGFMLTAGFAYFIH--DWRWLQIAITLP-GLLFLCYYWIIPESARWLLMKGRKDEAFV 282
            .....|.:|||..:|.||.:.  .|:.|.:..::| |:..:..|:...||.|||.::|:..||..
plant   210 VPFTLFVLGFMSLSGIAYLVRHASWKVLYLCTSIPAGIHSIFIYFFALESPRWLHLEGKNKEAIE 274

  Fly   283 IIEKAAKENKVEVPNEIYEQLVDEVAEKKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFV 347
            ::::.:..|:         ..::.|:.:.:..|......:.::.||.......|:..|:....|.
plant   275 VLKRISPANR---------GYLESVSSRLRPKETLEQTSSYSIKDLFIIKWAFRRVTLVMIIMFG 330

  Fly   348 NSGVYYGLSWNTNNLGGNQLVNFMISGAVEIPGYTLLLFTLNRWGRRS-------------ILCG 399
            ....|||:.....::..|..::..::..||:|.:.:....|.::.|||             :||.
plant   331 LGMSYYGVPLAVRDIKVNIYMSEALNAMVELPTFVVTPILLEQFSRRSSVLVNCLIGGASGVLCF 395

  Fly   400 TMMVAGISLLA------TIFVPSDMNWLIVACAMIGKLAITSSYGTIYIFSAEQFPTVVRNVGLG 458
            .|.:.|.:.:|      :.|           ||.||       :..:.|:..|.|||.|||    
plant   396 VMSLYGRTKIAFALELGSFF-----------CARIG-------FNLMAIYLVELFPTCVRN---- 438

  Fly   459 ASSMVAR----VGGILAPYLKLLGEIWRPLPLIICGALSLTAGLLSLLLPETLNKPMPETIEDGE 519
            :::|:.|    |||...|.:..||.....|...:.|......||.:||||||....:.:|:|:.|
plant   439 SATMMLRQALVVGGACCPLIASLGRNVPSLSFAVFGFAMSGLGLFALLLPETKGLSLCDTMEEQE 503

  Fly   520  519
            plant   504  503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 107/448 (24%)
MFS 135..491 CDD:119392 86/382 (23%)
OCT5NP_178059.1 MFS_OCT_plant 83..488 CDD:340936 103/438 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704438at2759
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.