DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and OCT6

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_173087.1 Gene:OCT6 / 838207 AraportID:AT1G16370 Length:521 Species:Arabidopsis thaliana


Alignment Length:463 Identity:120/463 - (25%)
Similarity:209/463 - (45%) Gaps:47/463 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 YTEEY-----LNGSI--PRSSNETK-TCSSYVYDRSKYLNSAVTEWNLVCSRSLLSATSDSLFML 139
            ||:.|     ||.:|  |.:|:..| ..|::.:|......|.::|:.|.||.|||.....|.|.:
plant    68 YTDAYPTWHCLNHTICDPSASDICKLPRSAWEWDGGSQGKSVISEFGLECSSSLLRGMPSSAFYI 132

  Fly   140 GVLLGSLIFGQM-SDKLGRKPTFFASLVLQLIFGVLAAVAPEYFSYTISRMIVGATTSGVFLVAY 203
            |.::|......: .|.||||.....|.....|..:....:...:.||..:.|:|.:.|..:..|.
plant   133 GAIVGGFFLALIPDDSLGRKKLVLFSTFAMSITSISVIFSTNVWIYTFLKFIIGFSRSQTWSYAL 197

  Fly   204 VIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIHD--WRWLQIAITLPGLLFLCYYWIIP- 265
            |:..|.|.:.:|..|.:.....|.:|||..:|.|:...|  ||:|.:..::|.:.:..:.::.. 
plant   198 VLISERVSTRWRPRATMIPFTLFVLGFMSLSGIAFLAQDSSWRYLYLYTSVPAVFYCIFLYLFAL 262

  Fly   266 ESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLVDEVAEKKKQDEMAASQPAATVFDLLR 330
            ||.|||.|:|:..||..::.|.:.:.|..:     |.:|.::..|::..|.|   |..::.|...
plant   263 ESPRWLHMQGKDKEAIDVLTKMSPKEKAYL-----ESVVSKLPLKQENFEQA---PTYSIKDFFF 319

  Fly   331 YPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLVNFMISGAVEIPGYTLLLFTLNRWGRR- 394
            .....|:.|::....|.....|||:.....::..|..::..::..||:|.:.:....|.|:.|| 
plant   320 RKWAFRRILVVMIIMFGLGISYYGVPLAARDIDVNIYLSETLNALVELPTFVITPILLERFNRRS 384

  Fly   395 SILCGTMMVAGISLLATIFVPSDMNWLIVA---------CAMIGKLAITSSYGTIYIFSAEQFPT 450
            |:|..|::.....:|.  ||.|.:....:|         ||.||       :..:.:|..|.|||
plant   385 SVLVNTLLGGASGVLC--FVLSILGKTEIAFAFELGTFFCARIG-------FNLMAVFMVEMFPT 440

  Fly   451 VVRNVGLGASSMVAR----VGGILAPYLKLLGEIWRPLPLIICGALSLTAGLLSLLLPETLNKPM 511
            .||:    :::|:.|    |||...|.:..:|.....:...|.|......|:..|:||||....:
plant   441 CVRS----SATMMFRQALVVGGACCPLIASIGRYIPSVSFAIFGIAMSGLGMFVLILPETKGLSL 501

  Fly   512 PETIEDGE 519
            .:::|:.|
plant   502 CDSMEEQE 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 118/456 (26%)
MFS 135..491 CDD:119392 92/373 (25%)
OCT6NP_173087.1 MFS_OCT_plant 88..494 CDD:340936 107/426 (25%)
xylE <220..>314 CDD:182225 28/101 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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