DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and OCT4

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_188702.2 Gene:OCT4 / 821613 AraportID:AT3G20660 Length:526 Species:Arabidopsis thaliana


Alignment Length:535 Identity:169/535 - (31%)
Similarity:260/535 - (48%) Gaps:61/535 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 HLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRC-ALPYENGSI-YELSPHLWNLSYP 71
            :.||||.:|.:.:.|.|:...:.|||.:..:|...:|::|| ......||: .||.|..|     
plant    41 YCGEFGRWQLKHFVLTCIAWALEAFHTMVMIFADQEPEWRCVGSDCRVGSLNCELDPSSW----- 100

  Fly    72 ENERCSYYDVDYTEEYLNGSIPRSSNETKTCSSYVYDRSKYLNSAVTEWNLVCSRSLLSATSDSL 136
                          |:..|.                     .:|.|:||.|:|..........:|
plant   101 --------------EWTAGK---------------------GSSTVSEWGLICGDKYKVGLVQAL 130

  Fly   137 FMLGVLLGSLIFGQMSD-KLGRKPTFFASLVLQLIFGVLAAVAPEYFSYTISRMIVGATTSGVFL 200
            |..|.::|:.:||.:|| |||||.:.....::..|||:..|.:|.|::|.:.|.:.|.:|.||.|
plant   131 FFAGCMIGAGVFGHLSDSKLGRKGSLTVVCIINAIFGIATAFSPNYWTYVVLRFLTGFSTGGVGL 195

  Fly   201 VAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIHDWRWLQIAITLPGLLFLCYYWIIP 265
            .|:|:|.|.:|.|.|..||::...|||.|..:.:|.||....||.|.|..:||.||||..  :||
plant   196 TAFVLATEPIGPSKRGVAGMSTFYFFSAGIAVLSGIAYVFRSWRELFIVSSLPSLLFLLI--VIP 258

  Fly   266 ---ESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLVDEVAEKKKQDEMAASQPAATVFD 327
               ||.||.|::|:.|||..::...||.|...:|..:...|.|:|.....:...|..   .::.|
plant   259 FISESPRWYLVRGKVDEAMKLMHSIAKTNGRHIPAGVTLALDDDVENNNGERNTAVE---GSLKD 320

  Fly   328 LLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLVNFMISGAVEIPGYTLLLFTLNRWG 392
            ::..|.:|.:.::.....|..|.||||||.|..||..|..:|..::...|:|.:.:....|:::|
plant   321 VILSPLMRMRLVISVAISFTVSIVYYGLSLNVGNLKTNLYLNVFVNAVSEMPAFAITAVLLDKYG 385

  Fly   393 RRSILCGTMMVAGISLLATIFVPSDMNWLIV--ACAMIGKLAITSSYGTIYIFSAEQFPTVVRNV 455
            |:.:..||...:.:..|....|.....|..|  ...::|...:..:|..::|:.||.|||||||.
plant   386 RKPLSIGTQWFSCVFCLVGFSVWGAGPWKSVRMVSGVLGIFGMAGTYNLLFIYIAELFPTVVRNA 450

  Fly   456 GLGASSMVARVGGILAPYLKLLGEIWRPLPLIICGALSLTAGLLSLLLPETLNKPMPETIEDGEN 520
            .||.::..|::|.||||::.:|||   .||..:.....|..|.|:..||||||||:.:|:     
plant   451 ALGCATQAAQMGAILAPFVVVLGE---ELPFGVFAVCGLVGGGLAFYLPETLNKPLYDTM----- 507

  Fly   521 FGKKPAPQETAEEGG 535
            ||...|..|:..|.|
plant   508 FGMHEAESESNRERG 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 162/510 (32%)
MFS 135..491 CDD:119392 123/361 (34%)
OCT4NP_188702.2 MFS_OCT_plant 90..496 CDD:340936 139/453 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 225 1.000 Domainoid score I682
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H80237
Inparanoid 1 1.050 252 1.000 Inparanoid score I1021
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 1 1.000 - - mtm8406
orthoMCL 1 0.900 - - OOG6_100389
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.960

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