DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and oct2

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001107932.1 Gene:oct2 / 797890 ZFINID:ZDB-GENE-080204-92 Length:554 Species:Danio rerio


Alignment Length:559 Identity:175/559 - (31%)
Similarity:290/559 - (51%) Gaps:50/559 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYE----LSP 63
            :|:::.|.|:||.|||||..|..||.::.||..:..|||...||..|    :..|:.|    ...
Zfish     4 FDELLQHAGDFGFYQKRISVLGSLPILLLAFVLIGVVFLGYTPDHWC----KTASLQEKCGFSEE 64

  Fly    64 HLWNLSYPEN------ERCSYYDVDYTEEYLNGSIPRSSNETKTCSSYVYDRSKYLNSA------ 116
            .:.:|:.|..      .:|    |.:.:...|||       ..:|:..:::.|.:|::.      
Zfish    65 QVRDLTVPRTGARGAFSKC----VKFDDALRNGS-------ALSCNISIFNNSTHLSACNEGWTF 118

  Fly   117 -------VTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVL 174
                   |||::|||..|.|:..:......|..:|:|:.|.::|:.|||..|.||:....:.|..
Zfish   119 NENRTTIVTEFSLVCEDSWLADLNQVSLAGGFFIGALVTGYLADRFGRKSCFIASIFGLGVSGTC 183

  Fly   175 AAVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYF 239
            ...:|.|......|.:.|....|.:...||:.:|..||:.|.|..|..:.|:|:|.:|....||:
Zfish   184 IIFSPYYPLLLFFRCLQGFFAKGAWTATYVLIIEFFGSNNRKFVSVMSRTFYSLGLVLLPALAYY 248

  Fly   240 IHDWRWLQIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLV 304
            |..||.||:|:|||..:||.|:|:||||.||||.:.:..||..|::..||.||..:|.:.:|  :
Zfish   249 IPSWRNLQLAMTLPTFIFLIYHWVIPESPRWLLSQRKTKEALSIVKSIAKCNKRSLPEDFHE--M 311

  Fly   305 DEVAEKKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLVN 369
            |.:.|  ||:|:  .:|:..  ||.:.|.:|:.|.::.:.||..:.|:.||.......|.|..::
Zfish   312 DLLIE--KQEEI--MRPSYK--DLFKTPKMRKHTFILIYAWFTGAVVFQGLVLRLGITGDNVFLD 370

  Fly   370 FMISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVACAMIGKLAIT 434
            |:||..||:|...:..|.::|.|||.::.....:.|.:.||..|:..:::||....|::|:||:.
Zfish   371 FLISAVVELPTGLIFYFLVDRIGRRPLMATVNFIGGAACLAVPFISPNISWLRRTIAIVGRLAVA 435

  Fly   435 SSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPY-LKLLGEIWRPLPLIICGALSLTAGL 498
            ....|:...:.|.:||.:||:|:...|..:.:|.::||: |..|..||:.|||::.|.:|:....
Zfish   436 IGNETVNFANTELYPTPLRNLGVSVCSSASDIGAVVAPFILYRLASIWQELPLLVYGVMSVLYSG 500

  Fly   499 LSLLLPETLNKPMPETIEDGENFGKKPAPQETAEEGGTQ 537
            |.:||||.....:|||::|.||...:   .:..|:.|.|
Zfish   501 LVMLLPEMKGVDLPETVDDVENLRSR---HKRKEKDGAQ 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 165/526 (31%)
MFS 135..491 CDD:119392 118/356 (33%)
oct2NP_001107932.1 2A0119 12..516 CDD:273328 165/526 (31%)
MFS 123..506 CDD:119392 130/390 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588705
Domainoid 1 1.000 280 1.000 Domainoid score I1640
eggNOG 1 0.900 - - E33208_3B9N9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.850

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