DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and Slc22a23

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_072146.1 Gene:Slc22a23 / 64559 RGDID:620302 Length:689 Species:Rattus norvegicus


Alignment Length:594 Identity:142/594 - (23%)
Similarity:249/594 - (41%) Gaps:97/594 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYD-DVITHLGEF-GPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYELS- 62
            :.|| .|:..||.. |.|||.:..|..:||:...|.:.:..|||.:|:|.|   :..|...||: 
  Rat    78 LDYDGSVLPFLGGLGGGYQKTLVVLTWIPALFIGFSQFSDSFLLDQPNFWC---HGAGKGTELAG 139

  Fly    63 -------PHLWNLSYPENERCSYYDVDYTEEYLNG-------SIPRSSNETKTCSSYVYD---RS 110
                   ..:.|.:.|.....|......|....|.       |.|...|....|..:.:|   |:
  Rat   140 ATVTGRWGDMGNWTSPSATPFSTASWGTTSNRSNSSDTPPLPSPPGKGNNDSNCECHAWDYGIRT 204

  Fly   111 KYLNSAVTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLA 175
            ..:.:.|::|:|||..:.....:....::|::.|.||.|.::|.:||:|....|::..||||:..
  Rat   205 GLVQNVVSKWDLVCDNAWKVHVAKFSLLVGLIFGYLITGCIADWVGRRPVLLFSVIFILIFGLTV 269

  Fly   176 AVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFI 240
            |::.....::..|...|...:|:.|..|.:.:|:.....|....:........|..|..|.|...
  Rat   270 ALSVNVTMFSTLRFFEGFCLAGIILTLYALRIELCPPGKRFIITMVASFVAMAGQFLMPGLAALC 334

  Fly   241 HDWRWLQIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEI---YEQ 302
            .||:.||..|..|.||.|.|:.|.|||.|||:...:.:.|..:|....::|.|...::|   ..:
  Rat   335 RDWQVLQALIICPFLLMLLYWSIFPESLRWLMATQQFESAKKLILYLTQKNCVSPESDIKGVMPE 399

  Fly   303 LVDEVAEKKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQL 367
            |..|::.:.|:         ..:..::...||.:..:::    .|||...||:.        :..
  Rat   400 LEKELSRRPKK---------VCIVKVVGTRNLWKNIVVL----CVNSLTGYGIH--------HCF 443

  Fly   368 VNFMISGAVEIP--------GYTL----------LLFTLNRWGRRSILCGTMMVAGISLLATIFV 414
            ...|:...|::|        .||:          :...:...|||.   |.::...::.||::..
  Rat   444 ARSMMGHEVKVPLLENFYADYYTMASIALASCLAMCLVVRFLGRRG---GLLLFMILTALASLLQ 505

  Fly   415 PSDMNWL---------------------------IVACAMIGKLAITSSYGTIYI-FSAEQFPTV 451
            ...:|.:                           .:|.:::|..| :.:.|::.: |.||..|||
  Rat   506 LGLLNLIGKYSQHPDSELQLKLAVGMSDSVKDKFSIAFSIVGMFA-SHAVGSLSVFFCAEITPTV 569

  Fly   452 VRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPLIICGALSLTAGLLSLLLPETLNKPMPETIE 516
            :|..|||.....|..|.:.||.::|..:....|..||....:|...:..|||||:.::.:||.|.
  Rat   570 IRCGGLGLVLASAGFGMLTAPIIELHNQKGYFLHHIIFACCTLICIICILLLPESRDQNLPENIA 634

  Fly   517 DGENFGKKP 525
            :||::.::|
  Rat   635 NGEHYTRQP 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 133/570 (23%)
MFS 135..491 CDD:119392 92/404 (23%)
Slc22a23NP_072146.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..188 4/25 (16%)
MFS_SLC22A23 187..608 CDD:341002 101/445 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346859
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.940

Return to query results.
Submit another query.