DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orct and Slc22a4

DIOPT Version :10

Sequence 1:NP_524479.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_071606.1 Gene:Slc22a4 / 64037 RGDID:621149 Length:553 Species:Rattus norvegicus


Alignment Length:563 Identity:193/563 - (34%)
Similarity:297/563 - (52%) Gaps:54/563 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYELSPHLWN 67
            ||:||..||::||:|:.|::||....|...|:.::.|||...|:.||.:|:    ...||....|
  Rat     4 YDEVIAFLGDWGPFQRLIFFLLSASIIPNGFNGMSVVFLAGTPEHRCLVPH----TVNLSSAWRN 64

  Fly    68 LSYPEN--------ERCSYY-----------------DVDYTEEYLNGSIPRSSNETKTC-SSYV 106
            .|.|..        :.|..|                 |||.  |.|         |.::| ..:.
  Rat    65 HSIPLETKDGRQVPQSCRRYRLATIANFSALGLEPGLDVDL--EQL---------EQESCLDGWE 118

  Fly   107 YDRSKYLNSAVTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIF 171
            |.:..:|::.||||||||.....:..:.|||.:|||.||.:.||:||:.|||...||::.:|..|
  Rat   119 YSKDVFLSTIVTEWNLVCEDDWKTPLTTSLFFVGVLCGSFVSGQLSDRFGRKKVLFATMAVQTGF 183

  Fly   172 GVLAAVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYR-LFAGVAMQMFFSVGFMLTAG 235
            ..:...:..:..:|:...|||......::||:::..|::..|.| ||:.:.:..||::|:|:...
  Rat   184 SFVQIFSTNWEMFTVLFAIVGMGQISNYVVAFILGTEILSKSVRILFSTLGVCTFFAIGYMVLPL 248

  Fly   236 FAYFIHDWRWLQIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIY 300
            |||||.|||.|.:|:|||||..:..:|.||||.|||:.:.|.:||..||:||||.|.:..|..|:
  Rat   249 FAYFIRDWRMLLLALTLPGLFCVPLWWFIPESPRWLISQRRFEEAEQIIQKAAKMNGIMAPAVIF 313

  Fly   301 EQLVDEVAEKKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGN 365
            :.|       :.|:..:..|....:.||.:..|:...|::....|.:.|..|:.||.|..||.|:
  Rat   314 DPL-------ELQELNSLKQQKVFILDLFKTRNIATITVMSVMLWMLTSVGYFALSLNVPNLHGD 371

  Fly   366 QLVNFMISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVACAMIGK 430
            ..:|..:||.:|:|.|......|....||.|:.|.:...|..||....||.|.|::.:...|:||
  Rat   372 VYLNCFLSGLIEVPAYFTAWLLLRTLPRRYIIAGVLFWGGGVLLLVQVVPEDYNFVSIGLVMLGK 436

  Fly   431 LAITSSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPLIICGALSLT 495
            ..:||::..:|:|:||.:||:|||:.:|.:||.:|||.|:|||...||...|.||.|:.|:|::.
  Rat   437 FGVTSAFSMLYVFTAELYPTLVRNMAVGITSMASRVGSIIAPYFVYLGAYNRLLPYILMGSLTVL 501

  Fly   496 AGLLSLLLPETLNKPMPETIED-----GENFGKKPAPQETAEE 533
            .|:::|..||:....:||.:|.     |...|||.......||
  Rat   502 IGIITLFFPESFGVTLPENLEQMQKVRGFRCGKKSTVSMDREE 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_524479.1 2A0119 11..514 CDD:273328 180/529 (34%)
Slc22a4NP_071606.1 2A0119 12..519 CDD:273328 179/528 (34%)

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