DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and sv2

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_009296040.1 Gene:sv2 / 570651 ZFINID:ZDB-GENE-000607-80 Length:522 Species:Danio rerio


Alignment Length:514 Identity:119/514 - (23%)
Similarity:208/514 - (40%) Gaps:97/514 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 TEEYLNGSIPRSSNETKTC-SSYVYDRS---------KYLNSAVTEW-------NLVCSRSLL-S 130
            ||..|:.:.....:|..:| ....|:.:         .:|...|..|       .::|...|| :
Zfish     9 TEPLLSSANNEEDDEQASCRKKLTYEEAVEKAGFGLFHWLLLVVCGWANASDAVEILCVSFLLPT 73

  Fly   131 ATSD-------------SLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAPEYF 182
            |..|             |:| ||:::|..::|.::|:.||:.....||.:...||.:|::||.::
Zfish    74 ARCDLQLSSADMGILTASIF-LGMMVGGCVWGFLADRRGRRSVLVVSLAVNGTFGAVASLAPTFW 137

  Fly   183 SYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFI------H 241
            .:.:.|...|....|...|.:....|......|.....|:..|:..|.:|.||.|:.:      |
Zfish   138 LFLLLRFFSGVGVGGSIPVIFSYFSEFQPCLRRGAMISALATFWMAGNILAAGVAWLVIPRTSLH 202

  Fly   242 -DWRWLQ--------IAITLPGL-LFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENK--VE 294
             ||.||.        :..::|.| ..|.:...:|||.::|:..||:.||..:.:|..|.|.  ..
Zfish   203 ADWGWLDFQSWRLFVVLCSIPSLSSALIFRLFMPESPKFLMEAGREMEALSVFQKIYKLNNRGAT 267

  Fly   295 VPNEIYEQLV----DEVAEKKKQDEMAA-------SQPAATVFDLLRYPNLRRKTLLIFFDWFVN 348
            .|..:...::    |||..:.......:       :|....:..|...|...|..:|:...:.::
Zfish   268 KPFPVSGLMIRPKDDEVKNRPSHSSSRSQRFINQLTQALVPLKQLFVRPLASRSVVLVIIFFCIS 332

  Fly   349 SGVYYGL-SW-----NTNNLGGNQLVNF----------------------MISGAVEIPGYTLLL 385
            .| |||| .|     .....||:...|.                      .|:.|..:||....:
Zfish   333 FG-YYGLWMWFPELFKRAEDGGSPCANMSRAQNAENEKCYPVKTAVYMEGFITAASNLPGNIFTI 396

  Fly   386 FTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVACAMIGKLAITSSYGTIYIFSAEQFPT 450
            ..::|.|.:.:|..:::|:|:|:.....|.:....|||:|...|...|  |:..:.:...|.:||
Zfish   397 LLMDRIGGKILLSVSLLVSGVSVFVIYVVKTKTQSLIVSCVFSGVSVI--SWNALDVVGTELYPT 459

  Fly   451 VVRNVGLGASSMVARVGGILAPYLKLLGEIWR---PLPLIICGALSLTAGLLSLLLPET 506
            .:|:..||..:.|.||..|:...  :.|::..   .:||::...|.|..||.:|.||:|
Zfish   460 QLRSSALGVFTGVGRVAAIMGNV--VFGQLVDSSCAVPLLMVCVLLLAGGLAALWLPQT 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 119/514 (23%)
MFS 135..491 CDD:119392 97/415 (23%)
sv2XP_009296040.1 2A0115 33..488 CDD:273327 104/460 (23%)
MFS 50..500 CDD:119392 104/455 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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