DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and slc22a31

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_699154.4 Gene:slc22a31 / 570565 ZFINID:ZDB-GENE-130530-858 Length:610 Species:Danio rerio


Alignment Length:564 Identity:145/564 - (25%)
Similarity:250/564 - (44%) Gaps:64/564 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYD-DVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPD-FRCALPYENGSIYELSP 63
            |.|: .:...:|.:|.|.:.|......|....:.:....||....|: :.|.   .:.::...|.
Zfish     1 MEYETKIYPQVGGYGRYNRIITLFSWFPNFAVSLNLFTDVFFTLVPESYHCK---PDQALLPPSA 62

  Fly    64 HLWNLSYPENERCSYYDVDYTEEYLNGSIP-RSSNETKTCSSYVY--DRSKYL------------ 113
            .|.|||              .:.|||.::| ...:....|..|.|  :.|.|.            
Zfish    63 LLSNLS--------------RQAYLNLTVPWLKGSGFSHCELYKYPVNVSNYTDDVERDVVSCTG 113

  Fly   114 -----------NSAVTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVL 167
                       |:.||||||||............||.|..||.::.|.:.|.|||:.....|:||
Zfish   114 GWEFSKPAGLQNNLVTEWNLVCDDYWKIPLQHICFMTGWTLGYILLGTLCDWLGRRRALLLSVVL 178

  Fly   168 QLIFGVLAAVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFML 232
            ..:.|::|.::....::...|:..|:|.:||||.:|:..||....|:||...:....|.....:|
Zfish   179 SGLLGIMACISNSPSAFPFLRLCQGSTLAGVFLSSYIARLEWCDPSHRLMVSMVSGFFAVFAELL 243

  Fly   233 TAGFAYFIHDWRWLQIAITLPGLLFLCYYW----IIPESARWLLMKGRKDEAFVIIEKAAKENKV 293
            ..|.|....||..||...||| ||.|..||    :.|||.||||...:..:|...::..:..|.:
Zfish   244 LPGLAVLCRDWPVLQAVATLP-LLLLLSYWCCASVFPESPRWLLATAQIPQAKECLQSFSARNGM 307

  Fly   294 EVPNEIY--EQLVDEVAEKKKQDEMAASQPA-ATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGL 355
            .|.:|:|  |.|:.|:.|...:|    .||. ..||:|.....:.:..|::.|..|:.:|:.|..
Zfish   308 CVSDELYPAETLLSEIDEAFPED----VQPEYHHVFELRHTRVIWKNCLILGFTLFIGTGIQYCF 368

  Fly   356 SWNTNNLGGNQLVNF---MISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSD 417
            :.|.:....:...::   :::||:   ....|..|::|:|||.:|....::.|:|.|..:.:...
Zfish   369 TRNLHIYSPHFYFSYFLRVLTGAL---ACIFLCVTVDRYGRRGMLLLAAIITGLSSLLLLALTQY 430

  Fly   418 MN-WLIVACAMIGKLAITSSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIW 481
            :: .|::..:::|.|:..:.......|.:|..||:||...||.......:|...:..::|.....
Zfish   431 LHGGLVLVLSVVGLLSSQALAMLSMFFGSEVMPTIVRGGTLGLIMSAGCIGMAASSLMELQNNGG 495

  Fly   482 RPLPLIICGALSLTAGLLSLLLPETLNKPMPETIEDGENFGKKP 525
            ..|..:|..:.::.:.|..:||||:.:||:|::::|||...:.|
Zfish   496 YFLHHVIFASFAVLSVLCIMLLPESKHKPLPDSLKDGERQRRPP 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 139/540 (26%)
MFS 135..491 CDD:119392 99/366 (27%)
slc22a31XP_699154.4 2A0119 12..527 CDD:273328 138/539 (26%)
MFS <347..518 CDD:119392 35/173 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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