DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and si:dkey-119m7.4

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001038399.1 Gene:si:dkey-119m7.4 / 560629 ZFINID:ZDB-GENE-040724-70 Length:413 Species:Danio rerio


Alignment Length:420 Identity:163/420 - (38%)
Similarity:238/420 - (56%) Gaps:15/420 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYELSPHL 65
            |.:|.|:..:|.||.:||.:|..:|||.|..|||.|..||..|.|...|...:..|.  ...|.|
Zfish     1 MNFDKVLDRIGGFGRFQKTLYVWICLPQIFLAFHMLVSVFTGAVPPHLCRSSWPVGD--SAGPRL 63

  Fly    66 WNLSYPE--NERCSYYDVDYTEEYLNGSIP--RSSNETKTCS-SYVYDRSKYLNSAVTEWNLVCS 125
             |||:..  .|.|: ...|.:....|.|:|  ..|:..|.|: .:.:.:..:|::..|||:|||.
Zfish    64 -NLSFSSAPGESCT-PSQDGSLPQRNHSLPITEHSSTAKGCTGGWEFSKEVFLSTIATEWDLVCE 126

  Fly   126 RSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAPEYFSYTISRMI 190
            .:.::....|::|.|:|:|:::||.::||.||:......|.:|.||||.||.||.::.|.:.|.:
Zfish   127 NATMNNIGSSIYMFGLLVGAVLFGALADKYGRRIIILIGLAIQAIFGVGAAFAPNFYIYVLLRFV 191

  Fly   191 VGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIHDWRWLQIAITLPGL 255
            ||.|.|.|.:.|:|:..|..|...|:.|||....||..|::|.||.||.|.|||.||:||:.|..
Zfish   192 VGTTVSAVIMNAFVLGTEWTGPKKRMLAGVITDYFFGFGYILLAGVAYLIRDWRKLQLAISAPSF 256

  Fly   256 LFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLVDEVAEKKKQDEMAASQ 320
            |||.|.|::|:|||||:...:.:||..:|.|||..|...:.::..     |:.:..|..|....|
Zfish   257 LFLFYVWVLPKSARWLMANNKHEEALDLIRKAALINGKPLEDDDM-----ELYQSPKSSEKLQEQ 316

  Fly   321 PAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLVNFMISGAVEIPGYTLLL 385
            ...||.||:|.|.:|:::|::|:.||||..||||||.|.::.|.|..:..||.|.||:|..|:.|
Zfish   317 RKYTVLDLVRTPRMRKQSLILFYLWFVNVLVYYGLSLNISDFGMNIYLTQMIFGLVEMPARTITL 381

  Fly   386 FTLNRWGRRSILCGTMMVAGISLLATIFVP 415
            ||||| .||......:.|.|::.|.|||:|
Zfish   382 FTLNR-SRRISQLAFLAVGGLACLLTIFIP 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 160/410 (39%)
MFS 135..491 CDD:119392 119/281 (42%)
si:dkey-119m7.4NP_001038399.1 2A0119 11..413 CDD:273328 160/410 (39%)
MFS 112..>273 CDD:119392 70/160 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588662
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H80237
Inparanoid 1 1.050 374 1.000 Inparanoid score I2060
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 1 1.000 - - mtm6383
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1010.000

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