DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and slc22a16

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_001020659.1 Gene:slc22a16 / 557279 ZFINID:ZDB-GENE-041001-166 Length:565 Species:Danio rerio


Alignment Length:564 Identity:180/564 - (31%)
Similarity:287/564 - (50%) Gaps:50/564 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GYDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALP-------YEN---- 55
            |.:.:...||.|..:|..:|:.....||.|..|.||.|||:..|.|.|..|       |:|    
Zfish     4 GVERLFDELGHFKRFQACLYFAAIFQAISCGIHYLASVFLVETPKFLCNPPLNITDVLYKNLSFT 68

  Fly    56 ----------------------GSIYELSPHLWNLSYPENERCSYYDVDYTEEYLNGSIPRSSNE 98
                                  |..:||||.|..|      |....:..| |.:.|.|:      
Zfish    69 SLADIWTHYKTGDGPVVVRTSQGDQWELSPCLKAL------RLDAINFQY-EFFGNKSV------ 120

  Fly    99 TKTCSSYVYDRSKYLNSAVTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFA 163
             ::|.::|||.|:...|.||:|:|||.|..|:..:...||||||:|:|:||..:|::||:|...|
Zfish   121 -ESCGAFVYDHSEVEQSIVTDWDLVCEREWLAKLTQPTFMLGVLIGALMFGDAADRIGRRPVLMA 184

  Fly   164 SLVLQLIFGVLAAVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSV 228
            :.:.|.||||..|....|:.:.:.|.::...:||..:|.:|...|..|...|.:..:.:...|:|
Zfish   185 TSLCQFIFGVTVAFTGNYYLFVVMRFLLATVSSGYLVVVFVYVTEFTGIKVRTWTSMHVHAAFAV 249

  Fly   229 GFMLTAGFAYFIHDWRWLQIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKV 293
            |.|:.|...|.:..|...||.:||....||.|.|..||:..:|:.|||..||..:::..|..|.:
Zfish   250 GIMVVALVGYLVRVWWIYQIILTLSTSPFLLYCWKFPETPFYLMAKGRYKEAQELLDTMAYINGL 314

  Fly   294 EVPNEIYEQLVDEVAEKKKQDEMAAS--QPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLS 356
            . |......|.|.......:|...|.  :...::.|:.....:..::...:..||:.|..||..|
Zfish   315 P-PTLKVSDLQDGCDRTPLKDNKQAMEVEKRLSMLDMFGSLKMAGRSATCWAIWFIGSLGYYVFS 378

  Fly   357 WNTNNLGGNQLVNFMISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWL 421
            ..:.||||||.:|..::||||:|.|.:..|.::|:||:......:::.|::.:..|.||.|:..|
Zfish   379 LGSVNLGGNQYINLFLAGAVEVPSYLIGCFAMDRFGRKKTCAPALLLGGVACMLIIVVPQDVEVL 443

  Fly   422 IVACAMIGKLAITSSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPL 486
            .:..:|.||.||..::|.||:::.|.:||::|::.:|:.||:.|||.::||:...|.:||..||.
Zfish   444 AIVLSMTGKFAIAIAFGLIYLYTCELYPTIIRSLAVGSGSMMCRVGSVVAPFCVYLADIWIYLPQ 508

  Fly   487 IICGALSLTAGLLSLLLPETLNKPMPETIEDGENFGKKPAPQET 530
            :|.|.|:...|:|::.|||||.:|:..|:|:.|..|.||..:.|
Zfish   509 LIVGILAFIIGILTMFLPETLGEPLTSTLEEAEALGSKPNTKNT 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 171/537 (32%)
MFS 135..491 CDD:119392 116/357 (32%)
slc22a16NP_001020659.1 2A0119 13..536 CDD:273328 171/537 (32%)
MFS 158..526 CDD:119392 120/368 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588669
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.880

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