DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and SVOP

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_061181.1 Gene:SVOP / 55530 HGNCID:25417 Length:548 Species:Homo sapiens


Alignment Length:458 Identity:117/458 - (25%)
Similarity:211/458 - (46%) Gaps:61/458 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 EWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAPEYFS 183
            ||.|   .|...|...|:..:|::..|.::|.:||:.|||.....|::..|.:|:|:|.||.|..
Human   114 EWRL---PSWQVALLTSVVFVGMMSSSTLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPVYSW 175

  Fly   184 YTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIH---DWRW 245
            ..:.|.:||....|| ..:..:..|.:....|....:.:::|:::|.:.....|.|:.   .|||
Human   176 ILVLRGLVGFGIGGV-PQSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVVLAVFVMPSLGWRW 239

  Fly   246 LQIAITLPGLLF--LCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLVDEVA 308
            |.|...:|.|||  ||::  :|||||:.::.|.:::|...:::.|.||...:|  :.:.::....
Human   240 LLILSAVPLLLFAVLCFW--LPESARYDVLSGNQEKAIATLKRIATENGAPMP--LGKLIISRQE 300

  Fly   309 EKKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNN------------ 361
            ::.|..::..             |:.|..|||::|.||.|:..||||...|..            
Human   301 DRGKMRDLFT-------------PHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISS 352

  Fly   362 ---------------LGGNQLVNFMISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGI-SLLA 410
                           |.....::.:.:...|.||..:.|:.::|.||:..:....::... |||.
Human   353 RKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLL 417

  Fly   411 TIFVPSDMNWLIVACAMIGKLAITSSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYL- 474
            .|.|..::..|::   .|.:..|:..:...|:::.|.:||..|.:|||..|.:||||.::.|:: 
Human   418 FICVGRNVLTLLL---FIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIA 479

  Fly   475 KLLGEIWRPLPLIICGALSLTAGLLSLLLP-ETLNKPMPETIEDGENFGKKPAPQETAEEGGTQE 538
            :::.|....|.|.:.....|.|.|.|..|| ||..:.:.|:  ....:|::...:.....|.|:.
Human   480 QVMLESSVYLTLAVYSGCCLLAALASCFLPIETKGRGLQES--SHREWGQEMVGRGMHGAGVTRS 542

  Fly   539 LSG 541
            .||
Human   543 NSG 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 111/429 (26%)
MFS 135..491 CDD:119392 98/389 (25%)
SVOPNP_061181.1 MFS_SVOP 87..509 CDD:340999 107/418 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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