DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orct and Svopl

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_008761085.2 Gene:Svopl / 500085 RGDID:1566053 Length:446 Species:Rattus norvegicus


Alignment Length:447 Identity:108/447 - (24%)
Similarity:183/447 - (40%) Gaps:84/447 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 EWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAPEYFS 183
            ||.|   .:...|...::...|.::.|::||.::|:.||......|.:....|.:|.:.:|.|..
  Rat    30 EWQL---ENWQVAFVTTMVFFGYMVSSILFGLLADRYGRWKILLLSFLWGAYFSLLTSFSPSYIW 91

  Fly   184 YTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFI---HDWRW 245
            :...|.:||...|| .....:|..|.:.:.||.:.....|:|:..|.:|....|..:   ..|||
  Rat    92 FVFLRTMVGCGVSG-HAQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIISMASVVIPTIGWRW 155

  Fly   246 LQIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLVDEVAEK 310
            |....::||::.:..:..||||||:.:..|....|...:|..||.|:..:|.   .:||:.:.||
  Rat   156 LIRIASIPGIILIMAFKFIPESARFNVSTGNTQAALDTLESIAKMNRSVMPE---GRLVEPILEK 217

  Fly   311 KKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLV------- 368
            :           ....|||....| |.||.|:..|...|..|||:...:..|....||       
  Rat   218 R-----------GRFADLLESKYL-RTTLQIWIIWLGISFAYYGVILASAELLERDLVCGSKSES 270

  Fly   369 -----------------------------NFMISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVA 404
                                         ..:||...||....|.:..:|..|||..|..||...
  Rat   271 EPEVVENMGDAEEGRSPCYCHMFAPSDYRTMIISTLGEIALNPLNILGINFLGRRLSLSITMGCT 335

  Fly   405 GISLLATIFVPSDMNWLIVACAMIG-----KLAITSSYGTIYIFSAEQFPTVVRNVGLGASSMVA 464
            .:..|.       :|....:..:||     :..:.:::.||||::||.:||.:|.:|:|.|..:.
  Rat   336 ALFFLL-------LNICTSSAGLIGFLFMLRALVAANFNTIYIYTAEVYPTPMRALGMGTSGSLC 393

  Fly   465 RVGGILAPYL-------KLLGEIWRPLPLIICGALSLTAGLLSLLLP-ETLNKPMPE 513
            |:|.::||::       ..||      .|.:..::.:...:.:..|| ||..:.:.:
  Rat   394 RIGAMVAPFISQVLMSASFLG------ALCLFSSVCVVCAISAFTLPIETKGRALQQ 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 108/447 (24%)
MFS 135..491 CDD:119392 100/406 (25%)
SvoplXP_008761085.2 MFS_SVOPL 3..434 CDD:341000 104/435 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347063
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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