DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and slc22a15.1

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_031751719.1 Gene:slc22a15.1 / 448510 XenbaseID:XB-GENE-959503 Length:560 Species:Xenopus tropicalis


Alignment Length:568 Identity:189/568 - (33%)
Similarity:281/568 - (49%) Gaps:73/568 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDDVITHLGEFGPYQKRIYYLLC-LPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYELSPH 64
            |..:..:..:||.|.||..:.:||. |..:..|...:....|.|.|      ||          |
 Frog    27 MEVEGALKLVGEMGIYQIYLSFLLAVLLQLYSATEAIIITILGATP------PY----------H 75

  Fly    65 LWNLSYPEN-ERCSYYDVDYTEEYLNGSIPRSSNETKTCSSYVYDRSKYLNSAVTEWNLVCSRSL 128
            ..|.|...| .|...|......|..:|.:....|.|               |.|:||.||...:.
 Frog    76 WMNDSLTANGSRGKQYGSQLPAEGEHGHVVFDGNFT---------------SIVSEWFLVGGAAY 125

  Fly   129 LSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAPEYFSYTISRMIVGA 193
            ..:.|.|::..|||:|.:.|||:||:.||||.:...|.|:::|.|:.|:.|.:..:.::|.:||.
 Frog   126 EVSVSSSVYFGGVLIGVISFGQLSDRFGRKPVYVTGLALEVVFAVMNALTPIFPLFLLTRFLVGV 190

  Fly   194 TTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIHDWRWLQIAITLPGLLFL 258
            ...|:.|||:|:..|.:|:||...||....:.|:||....|...|||..||.|.:.:.:.|...|
 Frog   191 MNGGMSLVAFVLLNECIGASYWAAAGSLGSLCFAVGIAQFALIGYFIRSWRLLALLVNVQGAAVL 255

  Fly   259 CYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLVDEVAEKKKQDEMAASQPAA 323
            .....||||.|||..:||..||...:....:.|:         :.|.......:|.:.|.|....
 Frog   256 ALSLCIPESPRWLHAQGRLREAQESLLSLGRRNR---------RKVTSFTLCPRQKDSAHSANIL 311

  Fly   324 TVFDLLRYPN--LRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLVNFMISGAVEIPGYTLLLF 386
            |:     |.|  ||::||::.:.|||.|.|||||:.::.:|||:..:|..:||..|:|.|.|.::
 Frog   312 TI-----YSNAILRQRTLIMMWVWFVCSLVYYGLTLSSGDLGGDIYLNLALSGLAELPAYPLCMY 371

  Fly   387 TLN--RWGRRSILCGTMMVAGISLLATIFVP--------SDMNWLIVACAMIGKLAITSSYGTIY 441
            .:|  |.|||..|.|.:.|.|.:.|..:.||        |.:|  ....:::|||.|::::..:|
 Frog   372 LINHKRVGRRGSLAGFLCVGGGACLLIMLVPGKTGSGPLSVLN--SQTLSLLGKLNISAAFNIVY 434

  Fly   442 IFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPLIICGALSLTAGLLSLLLPET 506
            |:|:|.:||.|||:|:|..||.:|:|||:||::..|......||.|:.||..::|||||||||||
 Frog   435 IYSSELYPTCVRNLGMGVCSMFSRIGGIIAPFIPALRFAHWALPFIVFGAAGVSAGLLSLLLPET 499

  Fly   507 LNKPMPETIEDGENFGKKPAPQETAEEGG-------TQELSGMLNGKS 547
            |:.|:|||:.|     .:.||....|..|       ..||....||.|
 Frog   500 LSAPLPETLAD-----LRGAPYRRLEPDGEAMLHRPQAELGAFTNGSS 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 176/516 (34%)
MFS 135..491 CDD:119392 129/367 (35%)
slc22a15.1XP_031751719.1 MFS 90..497 CDD:421695 150/437 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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