DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and slc22a6l

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_996960.2 Gene:slc22a6l / 404609 ZFINID:ZDB-GENE-040426-2249 Length:560 Species:Danio rerio


Alignment Length:556 Identity:164/556 - (29%)
Similarity:285/556 - (51%) Gaps:59/556 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYELSPHL 65
            |.:.|::..:|..|.:|.....||.:|.::.|.|.|...|:.|.|...|            .||.
Zfish     1 MAFSDLLEQVGSTGRFQVLHVTLLSMPILMMASHNLLQNFVAAVPPHHC------------QPHA 53

  Fly    66 WNLSYPEN------------------ERCSYY--------DVDYTEEYLNGSIPRSSNETKTC-S 103
             |||....                  |||..|        .::.:|...:.|:  :..||::| .
Zfish    54 -NLSMSSTDAMDVLRATVPLGLNGKLERCKRYTTPQWQILSLNTSESLWDESM--AETETQSCED 115

  Fly   104 SYVYDRSKYLNSAVTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQ 168
            .:.|:.::..::.:|||:|||....|...|.:.:|.|||:|:::||.:||:.||:.....|.::.
Zfish   116 GWFYNMTEMSSTIITEWDLVCDYRALKQMSQTTYMGGVLVGAIVFGGLSDRFGRRVLLLISNLMM 180

  Fly   169 LIFGVLAAVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLT 233
            .|.|...|.:..:..:.:.|:..|...||:.|.::.:.:|.:.:..|...|......::.|.::.
Zfish   181 AIGGTCVAFSTSFTMFCVFRVCCGMALSGLVLNSFSLIVEWIPTRVRTVVGTGTGYCYTTGQLIL 245

  Fly   234 AGFAYFIHDWRWLQIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKEN------- 291
            |..||.|.|||||.:|::||..:...|.|...||||||::..:.::|...::..|:.|       
Zfish   246 AAVAYCIRDWRWLTLAVSLPFYVSFLYSWWFLESARWLVLTKKPEQAVKNLKTVARINGRSAEGD 310

  Fly   292 KVEVPNEIYEQLVDEVAEKKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLS 356
            |:::          |:.::..:.|||.|:.:.:..||||...:|..|:.:...||..|..|||||
Zfish   311 KIDL----------EMLQESMKKEMACSKGSYSALDLLRTSTMRTITICLSAVWFSTSFAYYGLS 365

  Fly   357 WNTNNLGGNQLVNFMISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWL 421
            .:....|.:..:..:|.|||:||...::...::..|||...||.:::|||.:|..:.||||:..|
Zfish   366 MDLQKFGVSIYLIQIIFGAVDIPAKIIVTICMSMLGRRPSQCGALVLAGIMILINLLVPSDLQML 430

  Fly   422 IVACAMIGKLAITSSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPL 486
            ..:.|:|||..:.:|:...|:::.|.:|||:|..|:|..||:||.|.::||.:.|||:.:..:|.
Zfish   431 RTSLAVIGKGCLAASFNCCYLYAGELYPTVIRQSGMGWVSMMARFGAMVAPMVLLLGDDYPWIPG 495

  Fly   487 IICGALSLTAGLLSLLLPETLNKPMPETIEDGENFG 522
            .|.|...:.:|:.:..|||||::|:|:||:|.::.|
Zfish   496 FIYGGAPIVSGIFAFFLPETLSQPLPDTIQDIDDRG 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 158/536 (29%)
MFS 135..491 CDD:119392 113/362 (31%)
slc22a6lNP_996960.2 2A0119 11..523 CDD:273328 158/536 (29%)
MFS 116..513 CDD:119392 124/406 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588747
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.980

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