DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and slc22a4

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_957143.1 Gene:slc22a4 / 393822 ZFINID:ZDB-GENE-040426-1517 Length:553 Species:Danio rerio


Alignment Length:556 Identity:181/556 - (32%)
Similarity:289/556 - (51%) Gaps:40/556 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYELSPHLWN 67
            |||:.:.||.:||:|..::..|.:..:...|..|..||:...|...|.:|.:    ..:|....:
Zfish     4 YDDITSFLGTWGPFQLTVFLALAISILPNGFVGLYIVFVGDTPAHECLIPEQ----INISSVWRD 64

  Fly    68 LSYP--------ENERCSYYDVD---------YTEEYLNGSIPRSSNETKTC-SSYVYDRSKYLN 114
            .:.|        :...||.|.:|         ||.   |..:..|..||:.| ..:.|.:..|.:
Zfish    65 AAIPTQMQDGVLKRSSCSRYRLDTLRQLSMLNYTP---NVEVNLSQIETEPCVDGWSYSQEFYQS 126

  Fly   115 SAVTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAP 179
            :.||||:|||.|......:.|::..|||:|:.:.|||||:.||:|..|..:.||.|..::...:|
Zfish   127 TIVTEWDLVCEREYKGPLTSSIYFCGVLVGTFLSGQMSDRYGRRPVLFTMMALQTITILIQMFSP 191

  Fly   180 EYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYR-LFAGVAMQMFFSVGFMLTAGFAYFIHDW 243
            .:..::.....||.:....::||||:..|::..:.| ||..:.:.|...:|.|.....||||..|
Zfish   192 SWEVFSAIYFFVGFSGFSNYVVAYVLGSEILSPASRVLFGSLGVFMGSGIGQMFFPLAAYFIRSW 256

  Fly   244 RWLQIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQL-VDEV 307
            |||.:...|.|||:...:|.||||.||||.:||..||..::.:||::|:|..|..|:... ::|.
Zfish   257 RWLVLTNALTGLLYFPLWWFIPESPRWLLSQGRTAEAEAVLRRAAEKNRVTAPEVIFSSSEIEEA 321

  Fly   308 AEKKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLVNFMI 372
            |:|:.|..        ::.|:|...|.....|:....|.|.:..||.|..||.||.||..:||.:
Zfish   322 AKKRIQKH--------SILDILSNCNAVSTILICSLLWMVITMSYYALILNTTNLHGNPYLNFFL 378

  Fly   373 SGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVACAMIGKLAITSSY 437
            |..||:|.|.:....|....||.....|:::.|..:.....:|:::..|..|..|:|||.:|:::
Zfish   379 SAVVEVPAYIIAALLLRFCSRRICQASTLLLGGALIFIIQLIPTELQGLATALEMLGKLCVTAAF 443

  Fly   438 GTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPLIICGALSLTAGLLSLL 502
            ..:|..::|.|||||||:.:|:.||.||:|.|::|::..||..:|.:|.|:.|.|:|.:|::|||
Zfish   444 CVVYAVTSELFPTVVRNMAMGSCSMTARIGSIISPFIIYLGNYYRYIPYIVIGGLALFSGVMSLL 508

  Fly   503 LPETLNKPMPETIED-----GENFGKKPAPQETAEE 533
            |||:..|.:||||..     |....:||....|.::
Zfish   509 LPESKGKVLPETIAQMQSVRGLRRCRKPPAASTEDK 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 170/522 (33%)
MFS 135..491 CDD:119392 123/357 (34%)
slc22a4NP_957143.1 2A0119 12..520 CDD:273328 170/522 (33%)
MFS 144..510 CDD:119392 130/373 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588462
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100389
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.870

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