DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and Slc22a20

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_941052.1 Gene:Slc22a20 / 381203 MGIID:2685809 Length:556 Species:Mus musculus


Alignment Length:553 Identity:182/553 - (32%)
Similarity:289/553 - (52%) Gaps:20/553 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYELSPHL 65
            |.:.|::..||..|.:|.....||.||..:.|.|.....|..|.|...|..|............:
Mouse     1 MAFTDLLDALGGVGRFQLVYTALLLLPCGLLACHTFLQNFTAAAPPHHCQHPANYTEPTTNVSGV 65

  Fly    66 W-NLSYPEN-----ERCSYYDVDYTEEYLNGSIPRSSNETKTC-SSYVYDRSKYLNSAVTEWNLV 123
            | ..:.|.|     |.|..| |:.....|..:.......|:.| ..:|||||.:.::.|.||:||
Mouse    66 WLRAAIPLNQHGDPEPCRRY-VEPQWALLKPNASSHGVATEGCKDGWVYDRSIFPSTIVMEWDLV 129

  Fly   124 CSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAPEYFSYTISR 188
            |....|...:.|::|.|||:|:.:||.::|:||||.....|.:...:.|...|....:.:|.:.|
Mouse   130 CEARTLRDLAQSIYMSGVLVGAALFGGLADRLGRKAPLVWSYLQLAVSGAATAYVGSFSAYCVFR 194

  Fly   189 MIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIHDWRWLQIAITLP 253
            .::|.|.||:.|.:..:.:|.:.:..|..||:.:...|::|.::.||.||.|..|||||.|::.|
Mouse   195 FLMGMTFSGIILNSLSLVVEWMPTRGRTVAGILLGFSFTLGQLILAGVAYLIRPWRWLQFAVSAP 259

  Fly   254 GLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKEN--KVEVPNEIYEQLVDEVAEKKKQDEM 316
            .|:|..|.|.:|||:||||:.|:..:|...::|.|..|  |.|     .|:|..||.....|||.
Mouse   260 FLVFFLYSWWLPESSRWLLLHGKAQQAVQNLQKVAMMNGRKAE-----GERLTTEVVSSYIQDEF 319

  Fly   317 AASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLVNFMISGAVEIPGY 381
            |:.:.:.::.||.|.|.:||.|..:...||.||..||||:.:....|.:..:...:.|.::||..
Mouse   320 ASVRTSNSILDLFRTPAIRRVTCCLMGVWFSNSVAYYGLAMDLQKFGLSIYLVQALFGIIDIPAM 384

  Fly   382 TLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVACAMIGKLAITSSYGTIYIFSAE 446
            .:...|:...|||:.:...:::||:.::|.:|:|.|:..|....|.:||..:.||:..:|:|:.|
Mouse   385 LVATTTMIYVGRRATVSSFLILAGLMVIANMFMPEDLQTLRTVQAALGKGCLASSFICVYLFTGE 449

  Fly   447 QFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPLIICGALSLTAGL-LSLLLPETLNKP 510
            .:||.:|.:|:|.:|:.||:||::||.:..||||...||.:..||.|:.||: ::..|.||.|.|
Mouse   450 LYPTEIRQMGMGFASVNARLGGLVAPLITTLGEISPVLPPVSFGATSVLAGMAVACFLTETRNVP 514

  Fly   511 MPETIEDGENFGK----KPAPQETAEEGGTQEL 539
            :.|||...|...|    |...::.:||...|:|
Mouse   515 LVETIAAMERRVKQGRSKRDTEQKSEEISLQQL 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 169/512 (33%)
MFS 135..491 CDD:119392 123/357 (34%)
Slc22a20NP_941052.1 2A0119 11..518 CDD:273328 169/512 (33%)
MFS 138..507 CDD:119392 128/373 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 526..556 6/22 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843535
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.980

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