DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and Slc22a30

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_795976.1 Gene:Slc22a30 / 319800 MGIID:2442750 Length:552 Species:Mus musculus


Alignment Length:555 Identity:162/555 - (29%)
Similarity:270/555 - (48%) Gaps:34/555 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDDVITHLGEFGPYQ-KRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPY-------ENGS 57
            |.:.:::..:|..|.:| .:|.::|.|..:|.. |.....|..|.|:.||..|.       :|||
Mouse     1 MAFQELLNQVGSLGRFQILQISFVLFLVGLVVP-HITMENFTAAIPNHRCWAPILDNDTASDNGS 64

  Fly    58 IYELSPHLWNLSYPEN-----ERC-SYYDVDYTEEYLNGSIPRSSNE----TKTC-SSYVYDRSK 111
            .......|..:|.|.:     ::| .:....:...:|||:.   |||    |:.| ..:|||||.
Mouse    65 RILSQDDLLRISIPLDSNLRLDKCRRFAQPQWHLLHLNGTF---SNETEPDTEPCVDGWVYDRSN 126

  Fly   112 YLNSAVTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAA 176
            :|::.||||:|||....|::.:...||:|:.:|::|.|.:||:.|||.....:|:...|.....|
Mouse   127 FLSTIVTEWDLVCESQALNSVAKFSFMIGLFIGAIICGHLSDRFGRKFILTCALLQFAITETCVA 191

  Fly   177 VAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIH 241
            .||.:|.|.:.|.:.|.:...:.:.::::.||.....:.....|......|:|:|:.||.|:...
Mouse   192 FAPSFFIYCLLRFLAGMSVEPISVNSHLLMLEWTSPKFLGMVAVLTSCAASIGYMILAGLAFLFR 256

  Fly   242 DWRWLQIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLVDE 306
            .||.||:|:::|...||.....:.||||||::..:..:....:.|.|..|.::...   ..|..|
Mouse   257 IWRHLQLAMSVPIFFFLILTRWMSESARWLIVTNKPQKGLKELRKVAHMNGMKNSG---NTLTME 318

  Fly   307 VAEKKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLVNFM 371
            |.|...::|:.|::..::..||...|.||::..::.|..::.:...:|||.:..:|..|.::...
Mouse   319 VVEASMKNELEAAKRKSSPRDLFHTPILRKRICVLSFMRYLFTISIFGLSLHLQHLSTNIILLQF 383

  Fly   372 ISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVACAMIGKLAITS- 435
            :|.|:.|....:..|.||..|||......|.:.||.:|..:|||.:|..|.:..|.:. .|::| 
Mouse   384 LSSALGILISVIGHFVLNHMGRRITQLVLMSLRGIFMLTAVFVPQEMQTLRIIMATLA-AALSSL 447

  Fly   436 --SYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPLIICGALSLTAGL 498
              ....::|  .|..||.:|..|:|..:|....|..|||...||......||.|..|..|:..|.
Mouse   448 CMCVSNLHI--NELLPTTLRATGMGVIAMFGNSGLFLAPLFMLLATYSANLPWIFYGGFSILYGF 510

  Fly   499 LSLLLPETLNKPMPETIEDGENFGKKPAPQETAEE 533
            ...|||||.|:|:|::|.|..|..|:  .::..||
Mouse   511 SVFLLPETKNQPLPDSIHDVGNDWKE--SRQAKEE 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 155/524 (30%)
MFS 135..491 CDD:119392 101/358 (28%)
Slc22a30NP_795976.1 2A0119 11..525 CDD:273328 154/523 (29%)
MFS 151..516 CDD:119392 105/370 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843648
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.940

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