DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and Slc22a4

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_062661.1 Gene:Slc22a4 / 30805 MGIID:1353479 Length:553 Species:Mus musculus


Alignment Length:563 Identity:196/563 - (34%)
Similarity:296/563 - (52%) Gaps:54/563 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYELSPHLWN 67
            ||:||..|||:||:|:.|::||....|...|:.::.|||...|:.||.:|    ....||....|
Mouse     4 YDEVIAFLGEWGPFQRLIFFLLSASIIPNGFNGMSVVFLAGTPEHRCLVP----DTVNLSSSWRN 64

  Fly    68 LSYPEN--------ERCSYY-----------------DVDYTEEYLNGSIPRSSNETKTC-SSYV 106
            .|.|..        :.|..|                 |||.  |.|         |.::| ..:.
Mouse    65 HSIPLETKDGRQVPQSCRRYRLATIANFSAMGLEPGQDVDL--EQL---------EQESCLDGWE 118

  Fly   107 YDRSKYLNSAVTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIF 171
            ||:..:|::.||||||||.....:..:.|||.:|||.||.:.||:||:.|||...||::.:|..|
Mouse   119 YDKDIFLSTIVTEWNLVCEDDWKTPLTTSLFFVGVLCGSFVSGQLSDRFGRKKVLFATMAVQTGF 183

  Fly   172 GVLAAVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYR-LFAGVAMQMFFSVGFMLTAG 235
            ..:...:..:..:|:...|||......::||:::..|::..|.| :|:.:.:..||::|:|:...
Mouse   184 SFVQIFSTNWEMFTVLFAIVGMGQISNYVVAFILGTEILSKSVRIIFSTLGVCTFFAIGYMVLPL 248

  Fly   236 FAYFIHDWRWLQIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIY 300
            |||||.|||.|.:|:|||||..:..:|.||||.|||:.:.|..||..||:||||.|.:..|..|:
Mouse   249 FAYFIRDWRMLLLALTLPGLFCVPLWWFIPESPRWLISQRRFAEAEQIIQKAAKMNSIVAPAGIF 313

  Fly   301 EQLVDEVAEKKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGN 365
            :.|       :.|:..:..|....:.||.|..|:...|::....|.:.|..|:.||.|..||.|:
Mouse   314 DPL-------ELQELNSLKQQKVIILDLFRTRNIATITVMAVMLWMLTSVGYFALSLNVPNLHGD 371

  Fly   366 QLVNFMISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVACAMIGK 430
            ..:|..:||.:|:|.|......|....||.|:.|.:...|..||....||.|.|::.:...|:||
Mouse   372 VYLNCFLSGLIEVPAYFTAWLLLRTLPRRYIIAGVLFWGGGVLLLIQVVPEDYNFVSIGLVMLGK 436

  Fly   431 LAITSSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPLIICGALSLT 495
            ..|||::..:|:|:||.:||:|||:.:|.:||.:|||.|:|||...||...|.||.|:.|:|::.
Mouse   437 FGITSAFSMLYVFTAELYPTLVRNMAVGITSMASRVGSIIAPYFVYLGAYNRLLPYILMGSLTVL 501

  Fly   496 AGLLSLLLPETLNKPMPETIED-----GENFGKKPAPQETAEE 533
            .|:::|..||:....:||.:|.     |...|||.......||
Mouse   502 IGIITLFFPESFGVTLPENLEQMQKVRGFRCGKKSTVSVDREE 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 183/529 (35%)
MFS 135..491 CDD:119392 134/356 (38%)
Slc22a4NP_062661.1 2A0119 12..519 CDD:273328 182/528 (34%)
MFS 123..510 CDD:119392 147/393 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843607
Domainoid 1 1.000 282 1.000 Domainoid score I1643
eggNOG 1 0.900 - - E33208_3B9N9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 349 1.000 Inparanoid score I2273
Isobase 1 0.950 - 0 Normalized mean entropy S3558
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 1 1.000 - - mtm11112
orthoMCL 1 0.900 - - OOG6_100389
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.770

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