DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and Slc22a17

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_803156.2 Gene:Slc22a17 / 305886 RGDID:631405 Length:520 Species:Rattus norvegicus


Alignment Length:516 Identity:147/516 - (28%)
Similarity:234/516 - (45%) Gaps:44/516 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 VFLLAKPDFRC---ALPYENGSIYELSPHLWNLSYPE---NERCSYYDVDYTEEYLNGSIPRSSN 97
            :|.|| |...|   ||| .|.|.:|..|:...:|...   ....:...|..|:...:|..|...|
  Rat     6 IFTLA-PPLHCHYGALP-PNASGWEQPPNSSGVSVAGAALAASAASRVVTSTDPSCSGFAPPDFN 68

  Fly    98 ETKTC-SSYVYDRSKYL-NSAVTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPT 160
            .   | ..:.|:....| .:|:.:|:|||...........||:||...|.|..|..:|:.||:..
  Rat    69 H---CLKDWDYNGLPVLTTNAIGQWDLVCDLGWQVILEQILFILGFASGYLFLGYPADRFGRRGI 130

  Fly   161 FFASLVLQLIFGVLAAVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMF 225
            ...:|.|....||..|.|.........|.::|...:||.|..|::.||:...:.||...:|.::.
  Rat   131 VLLTLGLVGPCGVGGAAAGSSTGIMTLRFLLGFLLAGVDLGVYLMRLELCDPTQRLRVALAGELV 195

  Fly   226 FSVGFMLTAGFAYFIHDWRWLQIAITLPGLLFLCYYW--IIPESARWLLMKGRKDEAFVIIEKAA 288
            ...|..|..|.|....|||:||..||.|.:|||.|.|  :..||||||::|.:.:||..::...|
  Rat   196 GVGGHFLFLGLALVSKDWRFLQRMITAPCILFLFYGWPGLFLESARWLIVKRQIEEAQSVLRILA 260

  Fly   289 KENKVEVPNEIYEQLVDEVAEKKKQD-EMAASQPAATVF---DLLRYPNLRRKTLLIFFDWFVNS 349
            :.|:.      :.|::.|.|::..|: |.....|..:.|   .||.|.|:.:..|::.|..|:..
  Rat   261 ERNRP------HGQMLGEEAQEALQELENTCPLPTTSTFSFASLLNYRNIWKNLLILGFTNFIAH 319

  Fly   350 GVYYGLSWNTNNLGGN----QLVNFMISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLA 410
            .:.:  .:.....||:    .|.:.:.||...: ....|..|::|:|||.||..:|.:.||:.|.
  Rat   320 AIRH--CYQPVGGGGSPSDFYLCSLLASGTAAL-ACVFLGVTVDRFGRRGILLLSMTLTGIASLV 381

  Fly   411 TIFVPSDMN-WLIVACAMIGKLAITSSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYL 474
            .:.:...:| ..|...:::|..:..:|.....:.:||..||.||..|||....:..:||:..|..
  Rat   382 LLGLWDYLNDAAITTFSVLGLFSSQASAILSTLLAAEVIPTTVRGRGLGLIMALGALGGLSCPAQ 446

  Fly   475 KL---LGEIWRPLPLIICGALSLTAGLLSLLLPETLNKPMPETIEDGE-----NFGKKPAP 527
            :|   .|...:.:.|..|..|.:   |..:|||||..|.:||.:.|||     :..::|.|
  Rat   447 RLHMGHGAFLQHVVLAACALLCI---LSIMLLPETKRKLLPEVLRDGELCRRPSLLRQPPP 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 141/496 (28%)
MFS 135..491 CDD:119392 106/369 (29%)
Slc22a17NP_803156.2 MFS 106..476 CDD:119392 109/381 (29%)
2A0114 111..475 CDD:273326 104/375 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346888
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.940

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