DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and LOC303140

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_008765965.1 Gene:LOC303140 / 303140 RGDID:1561735 Length:555 Species:Rattus norvegicus


Alignment Length:548 Identity:199/548 - (36%)
Similarity:297/548 - (54%) Gaps:58/548 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALP--------YENGSI- 58
            ||::...|||:||:|:.|::||....|...|..|:.|||.|.|:.||.:|        :.|.|| 
  Rat     4 YDELTAFLGEWGPFQRLIFFLLSASIIPNGFTGLSAVFLTASPEHRCLVPDTVNLSSAWRNHSIP 68

  Fly    59 YELS-----PHLWNLSYPENERCSYY-----------------DVDYTEEYLNGSIPRSSNETKT 101
            .|:.     ||          :|..|                 |||..:           .|.:.
  Rat    69 LEMKDGRQVPH----------KCRRYRLATIANFSALGLEPGEDVDLKQ-----------LELEN 112

  Fly   102 C-SSYVYDRSKYLNSAVTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASL 165
            | ..:.|.:..:|::.||||||||:.:..:..:.|:|.:||||||.|.||:||:.||||..|.::
  Rat   113 CLDGWEYSKEVFLSTIVTEWNLVCNDAWKAPLTTSMFYVGVLLGSFISGQLSDRFGRKPVLFWTM 177

  Fly   166 VLQLIFGVLAAVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYR-LFAGVAMQMFFSVG 229
            .:...|..|...:..:..:|:...:||......::.|:|:..|::..|.| :||.:.:.:||:.|
  Rat   178 GMHTGFSFLQVFSVNFEMFTLLFALVGMGHISNYVAAFVLGTEILSKSIRIIFATLGICIFFAFG 242

  Fly   230 FMLTAGFAYFIHDWRWLQIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVE 294
            ||:...|||||.|||.|.:||||||:|....:|.||||.|||:.:||..||.|||.||||.|.:.
  Rat   243 FMVLPLFAYFIRDWRMLLMAITLPGVLCGALWWFIPESPRWLISQGRVKEAEVIIRKAAKFNGIV 307

  Fly   295 VPNEIYEQLVDEVAEKKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNT 359
            .|:.|:    |.......||..|.:..:..::||:|..|:|..|::....|...|..|:|||.:|
  Rat   308 APSTIF----DPSETTNLQDGNAKNTQSHHIYDLVRTRNIRILTIMSIILWLTISVGYFGLSLDT 368

  Fly   360 NNLGGNQLVNFMISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVA 424
            .||.||..||..:..|||:|.|.|....|....||..:.|::.:.|..||....||||:.:|..|
  Rat   369 PNLNGNIYVNGFLLAAVEVPAYVLAWLLLQHVTRRYSMAGSLFLGGSVLLILQLVPSDLLYLSTA 433

  Fly   425 CAMIGKLAITSSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPLIIC 489
            ..|:||..|||:|..:|:::||.:||||||:|:|.||..:|:|.||:||...||...|.||.|:.
  Rat   434 LVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRHLPYIVM 498

  Fly   490 GALSLTAGLLSLLLPETLNKPMPETIED 517
            |:|::...:::...||:....:|:||::
  Rat   499 GSLTILTAIITFFFPESSGVSLPDTIDE 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 194/535 (36%)
MFS 135..491 CDD:119392 147/356 (41%)
LOC303140XP_008765965.1 2A0119 12..523 CDD:273328 194/535 (36%)
MFS 123..513 CDD:119392 158/393 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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