DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and SPCC2H8.02

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_587972.1 Gene:SPCC2H8.02 / 2538980 PomBaseID:SPCC2H8.02 Length:583 Species:Schizosaccharomyces pombe


Alignment Length:494 Identity:100/494 - (20%)
Similarity:194/494 - (39%) Gaps:139/494 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 RSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAPEYFSYTISRMI 190
            |.:::|.::    :|.::|.|:||.:.|..|||..:...:::.:|..:|....|:......::| 
pombe    85 RGVVNAATN----IGNIMGQLLFGFLGDFFGRKFVYGKEMMVVIIATILIICLPDRIPTPTAKM- 144

  Fly   191 VGATTSGVFLVAYVIALEM-VGSSYRLFAGVAMQ-------------MFFSVGFMLTAG------ 235
                   ::|.|:.:.|.: :|..|.:.|.:..:             :|.:.|:...||      
pombe   145 -------MWLFAFRVMLGIGIGGDYPMSASITSEQSLINRRGALLAWIFSNQGWGTLAGCVATLI 202

  Fly   236 ----FAYFIHD----------WRWLQIAITL-PGLLFLCYYWIIPESARWLLMKGRKDEAFVIIE 285
                |...::|          || :|..|.| |.::.|.....:.||.::...|..|......::
pombe   203 ILACFEKPLNDRGEYTKLNGVWR-IQFGIALFPAVIVLIPRLRMQESEQFKNSKNMKSPGEGDLD 266

  Fly   286 KAAKENKVEVPN-EIYEQLVDE----------VAEKKK--------QDEMAASQ-----PAATVF 326
            .|   :::|:.: :..|.|..|          :::||.        .:|:|.|.     |:.|..
pombe   267 SA---SQIELHDFKKKESLTAEFTTSSPSTASLSDKKNPGSVHIRPNNEVAPSSAPSRAPSTTSV 328

  Fly   327 D----------------LLRYPNLRRKTLLI--FFDWFVNSGVYYGLSWNTN--------NLGGN 365
            :                :..:...|...|||  ...||:....:||::.|.:        |.|.|
pombe   329 ESNTEGKESDIQTGSSFVSYFKEWRHAKLLIGSALSWFLLDIAFYGINLNQSVILQEMGFNKGVN 393

  Fly   366 Q--------LVNFMISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLI 422
            :        :.|.:|:.|..||||.:.:..:...||:.|     .:.|..:...:|......|..
pombe   394 EYHILQKNAIGNLIIAVAGYIPGYWVSVVLIEVMGRKWI-----QIQGFLICCLLFGVLAGTWET 453

  Fly   423 V------ACAMIGKLAITSSYG---TIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYL---- 474
            :      ||..:.:...  ::|   |.::..||.||:.||....|..:...:.|.||:..|    
pombe   454 ISTGGRFACVALAQFFF--NFGPNTTCFVIPAEVFPSRVRAFSHGICAACGKAGAILSALLFNKL 516

  Fly   475 -KLLG---EIWRPLPLIICGALSLTAGLLSLLLPETLNK 509
             :::|   .:|.....::.||      :::|:||||.|:
pombe   517 TEVIGFGNVLWIFFGCMVAGA------VVTLILPETANR 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 100/494 (20%)
MFS 135..491 CDD:119392 90/465 (19%)
SPCC2H8.02NP_587972.1 2A0109 38..557 CDD:129965 100/494 (20%)
MFS 42..544 CDD:119392 95/487 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
TreeFam 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.