DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and Slc22a25

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_620263.1 Gene:Slc22a25 / 192273 RGDID:621104 Length:552 Species:Rattus norvegicus


Alignment Length:545 Identity:153/545 - (28%)
Similarity:270/545 - (49%) Gaps:32/545 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPY---------ENG 56
            |.:.|::..:|..|.:|......:.:..|:.:.|.|...|....|:.||.:|.         :||
  Rat     1 MAFQDLLNQVGSLGRFQILQMTFILIFNIIISPHSLLENFTAVIPNHRCWVPILDNDTVSGNDNG 65

  Fly    57 SIYELSPHLWNLSYP-----ENERC-SYYDVDYTEEYLNGSIPR-SSNETKTC-SSYVYDRSKYL 113
            ::.:  ..|..:|.|     ..|:| .:....:...:|||:... :..:|:.| ..:|||:|.:|
  Rat    66 NLSQ--DDLLRVSIPLDSDLRPEKCRRFVQPQWDLLHLNGTFSSVTEPDTEPCVDGWVYDQSTFL 128

  Fly   114 NSAVTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVA 178
            ::.:|||:|||....|.:.:..||:.|:|:|::::|.::|:.||:.....:.:...:....||.|
  Rat   129 STIITEWDLVCESQSLDSIAKFLFLTGILVGNILYGPLTDRFGRRLILICASLQMAVTETCAAFA 193

  Fly   179 PEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIHDW 243
            |.:..|...|.:.|.:.|.|...:.::.:|.....::..|...:....::|..:.||.|:.:.:|
  Rat   194 PTFLIYCSLRFLAGISFSTVLTNSALLIIEWTRPKFQALATGLLLCAGAIGQTVLAGLAFTVRNW 258

  Fly   244 RWLQIAITLPGLLFLCYYWIIP-----ESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQL 303
            ..|.:|:::|     .::.::|     ||||||:|..:..:....:.|.|..|.::...::   |
  Rat   259 HHLHLAMSVP-----IFFLLVPTRWLSESARWLIMTNKLQKGLKELIKVAHINGMKNSTDV---L 315

  Fly   304 VDEVAEKKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLV 368
            ..||.....::|:.|||..::::||.|.||||::..|:....||......||..|..:|..|..:
  Rat   316 TIEVVRTIMKEELEASQTKSSLWDLFRTPNLRKRICLLSLVRFVVWLSVIGLLINFQHLRINVFL 380

  Fly   369 NFMISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVACAMIGKLAI 433
            ...:.|.:.||...:.:|.:|..|||......:.:.|||:||.||||.:|..|.:..|..|.:..
  Rat   381 LQCLLGIITIPANLVGIFLVNHLGRRISQLFIISLFGISILAIIFVPQEMQILRMVLATFGGVFS 445

  Fly   434 TSSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPLIICGALSLTAGL 498
            ..|..:..:.:.|..||::|...||...:....|..|:|...:|......||.||.|.||...||
  Rat   446 FVSVSSALVHANELLPTIIRATALGVIGIAGSTGAALSPLFMILRTYSDSLPWIIYGVLSFLGGL 510

  Fly   499 LSLLLPETLNKPMPETIEDGENFGK 523
            :.||||||.|:|:|::|:|.||.|:
  Rat   511 VVLLLPETKNQPLPDSIQDVENEGR 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 146/524 (28%)
MFS 135..491 CDD:119392 97/360 (27%)
Slc22a25NP_620263.1 2A0119 11..525 CDD:273328 145/523 (28%)
Aldolase_II 39..>85 CDD:294146 10/47 (21%)
MFS 125..506 CDD:119392 108/388 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347105
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.940

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