DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and Slc22a6

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_032792.2 Gene:Slc22a6 / 18399 MGIID:892001 Length:545 Species:Mus musculus


Alignment Length:556 Identity:169/556 - (30%)
Similarity:286/556 - (51%) Gaps:25/556 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALP-----YENGSIYE 60
            |.::|::..:|..|.:|.....::..|.::.|.|.....|..|.|...|..|     .::|.:..
Mouse     1 MAFNDLLKQVGGVGRFQLIQVTMVVAPLLLMASHNTLQNFTAAIPAHHCRPPANANLSKDGGLEA 65

  Fly    61 LSPHLWNLSYPENERCSYYDVDYTEEYLNGSIPRSSNETKTC-SSYVYDRSKYLNSAVTEWNLVC 124
            ..| |.....||:  |..:...:     ||:....:..|:.| ..:|||.|.:.::.||||||||
Mouse    66 WLP-LDKQGRPES--CLRFPFPH-----NGTEANGTGVTEPCLDGWVYDNSTFPSTIVTEWNLVC 122

  Fly   125 SRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAPEYFSYTISRM 189
            |.......:.||||:|||||:::||.::|:|||:.....:.:...:.|..||.||.|..|.|.|:
Mouse   123 SHRAFRQLAQSLFMVGVLLGAMMFGYLADRLGRRKVLILNYLQTAVSGTCAAYAPNYTVYCIFRL 187

  Fly   190 IVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIHDWRWLQIAITLPG 254
            :.|.:.:.:.:....:.:|.:....|.:.|..:...:|:|..|.||.||.:..||.||:|:::|.
Mouse   188 LSGMSLASIAINCMTLNMEWMPIHTRAYVGTLIGYVYSLGQFLLAGIAYAVPHWRHLQLAVSVPF 252

  Fly   255 LLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLVDEVAEKKKQDEMAAS 319
            .:...|.|...|||||....||.|.....:::.|:.|..:   |...:|..||.:...|.|:..:
Mouse   253 FVAFIYSWFFIESARWYSSSGRLDLTLRALQRVARINGKQ---EEGAKLSIEVLQTSLQKELTLN 314

  Fly   320 QPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLVNFMISGAVEIPGYTLL 384
            :..|:..:|||.|.|||..|.:...||..|..||||..:....|.:..:..:|.|||::|...:.
Mouse   315 KGQASAMELLRCPTLRRLFLCLSMLWFATSFAYYGLVMDLQGFGVSMYLIQVIFGAVDLPAKFVC 379

  Fly   385 LFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVACAMIGKLAITSSYGTIYIFSAEQFP 449
            ...:|..|||.....::::|||.:|....:|.....:..:.|::||..:.||:..|::::.|.:|
Mouse   380 FLVINSMGRRPAQLASLLLAGICILVNGIIPRGHTIIRTSLAVLGKGCLASSFNCIFLYTGELYP 444

  Fly   450 TVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPLIICGALSLTAGLLSLLLPETLNKPMPET 514
            |::|..|||..|.:||||.|::|.:.:..|.:..:||.|.||:.:.|..::.||||||.:|:|:|
Mouse   445 TMIRQTGLGMGSTMARVGSIVSPLISMTAEFYPSIPLFIFGAVPVAASAVTALLPETLGQPLPDT 509

  Fly   515 IEDGENFGKKPAPQETAEEG--------GTQELSGM 542
            ::|.::..:....|:..|:.        .|||.:|:
Mouse   510 VQDLKSRSRGKQKQQQLEQQKQMIPLQVSTQEKNGL 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 159/508 (31%)
MFS 135..491 CDD:119392 114/355 (32%)
Slc22a6NP_032792.2 2A0119 11..509 CDD:273328 159/508 (31%)
MFS 129..499 CDD:119392 118/372 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 515..545 5/29 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843674
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.980

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