DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and suex-2

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_501556.2 Gene:suex-2 / 183742 WormBaseID:WBGene00008271 Length:502 Species:Caenorhabditis elegans


Alignment Length:503 Identity:123/503 - (24%)
Similarity:205/503 - (40%) Gaps:87/503 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 NLSYPENERCSYYDVDYTEEYLNGSIPRSSNETKTCSSYVYDRSK-YLNSAVTEWNLVCSR---- 126
            |..|....:| ..|.|:..:.|   .|  .|.|:..|..:.|.|: :..||..|:...|:.    
 Worm    43 NFCYKLQSKC-LMDYDHNAQNL---CP--VNMTENASKCIADHSRLFFRSAQFEYQQDCTGLNGF 101

  Fly   127 SLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAPEYFSYTISRMIV 191
            ||.:||     .:|.|||::..|.::||.||:..:.:||:..:...||:|.....:|:.|.|:::
 Worm   102 SLSTAT-----FIGTLLGNIALGFLADKYGRRTIYLSSLLFGIPCVVLSAAITNIYSFYIFRILI 161

  Fly   192 GATTSGVFLVAYVIALEMVGSSYRL----FAGVAMQMFFSVGFMLTAGFAYFIHDWR---WLQIA 249
            |.:.||...|.:..|.||:..:.||    |:.      :....|:..|.||...:|:   ::..|
 Worm   162 GISVSGTLTVGWTYATEMISPNRRLRILAFSN------WPNARMIQVGLAYISQEWKTATYICAA 220

  Fly   250 ITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLVDEVAEKKKQD 314
            ::...|..|.|   :|||..||..|.:...|    .||.|  ::....:.|......|...:|  
 Worm   221 VSCLSLPILIY---LPESPIWLDQKQKYKNA----SKARK--RLRKIGKFYSNEHSTVVANRK-- 274

  Fly   315 EMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGG-----NQLVNFMISG 374
                    .|...:|:.|.||....:|.|.:|     |.||:....:|.|     |..:...:||
 Worm   275 --------FTPTRILKDPKLRNSFFMIIFMYF-----YVGLAVYITDLNGADMTKNLYLGQFLSG 326

  Fly   375 AVEIPGYTLLLFT---LNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVACAMIGKLAITSS 436
            .|......::..|   |...|||.:......:|.:..:. |.:...:||   ..:.:...|.|.:
 Worm   327 LVLSIAQFIIGMTEPYLTGLGRRVLFLIAQFIAMLCYIC-ILICLYLNW---KGSFLYLSAYTLA 387

  Fly   437 YGT-------IYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRP----LPLIICG 490
            |.|       .|:...|..||.||......:::..::|.|||...|.|...:.|    :.|.|| 
 Worm   388 YATQSLCLEAAYLSLVELMPTDVRATAGSTANICMKIGTILATLTKPLKFAYEPSLFFINLSIC- 451

  Fly   491 ALSLTAGLLSLL--LPETLNKPMPETIEDGENF----GKKPAPQETAE 532
                |.|::.:.  |.|:....|....:..:|.    .::..|.:|.:
 Worm   452 ----TIGMILVFFKLEESREADMKMIGQTNDNIASAHNEEEMPNQTIQ 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 120/479 (25%)
MFS 135..491 CDD:119392 95/381 (25%)
suex-2NP_501556.2 MFS 108..460 CDD:391944 97/390 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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