DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and oct-2

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_509899.3 Gene:oct-2 / 181325 WormBaseID:WBGene00003843 Length:757 Species:Caenorhabditis elegans


Alignment Length:611 Identity:169/611 - (27%)
Similarity:286/611 - (46%) Gaps:91/611 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIY--EL--SP 63
            ::.::..:|....:|..:|.::.:..:..|...|:.|:::.:||..|.:|:.|...:  ||  :.
 Worm   156 FEGILQLIGGCSYWQIIVYLIISVQQVPHAMFNLSVVYMMYQPDHWCKIPFFNEESFSAELGYTN 220

  Fly    64 HLWN------LSYP----------ENERCSYYDVDYTEEYLN-----------GSIPRSSNETKT 101
            :.|:      :::|          .:::|.|::.||....|:           |.|.|       
 Worm   221 YTWDQVLNSTIAFPRTFNKQRNELHHDQCHYFERDYVHIKLSPWAQVKDMNATGKINR------- 278

  Fly   102 CSSYVYDRSKYLNSAVTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLV 166
            |..:.||.|....:.|||||.||..:...|.....:.||.|:|..:.|.:||:.|||.......:
 Worm   279 CKEWEYDTSVMDRTIVTEWNRVCDNNWSRAHVHMSYSLGYLVGCFVGGFISDRYGRKTAITGFGI 343

  Fly   167 LQLIFGVLAAVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFM 231
            |.::||.|...:.|:..:.:.|.::.||.....|.|||:.:|:.|:.||...|..:|..::.|:.
 Worm   344 LTMLFGFLLTYSKEFEIFLVVRFLLAATNEAADLAAYVLCMEVTGTKYRSIVGSLIQAPWACGYA 408

  Fly   232 LTAGFAYFIHDWRWLQIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVP 296
            ..|..||....|..:.:...|..::.|...:.:|||.|||::..:..:|..||.:|...||..:|
 Worm   409 FLALIAYLTKSWTMIHLICVLLHIISLMLLYFLPESPRWLILNNKTKQAEKIIREACHYNKSRLP 473

  Fly   297 NEIYEQLVDEVAEKK--KQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGL---- 355
            :::  .||....:||  |.:|    :|  :.|.|.|...||.:.:::|..|...:.||||:    
 Worm   474 SDL--GLVRHAEKKKWMKHNE----KP--SYFHLFRSSELRFRNVVLFIVWIATALVYYGMVIAL 530

  Fly   356 ----SWNTNNLGGNQLVNFMISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLL-ATIFVP 415
                |.......||..:|..::||:|:|.....:|.| |.||:......:..:|:.|| :.:.|.
 Worm   531 SDQSSPGRRVFDGNFFLNNAMAGAIELPTLVFCVFLL-RMGRKRSQMLVLFGSGLFLLTSVVMVY 594

  Fly   416 SDMNWLIVACAMIGKLAITSSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEI 480
            ...:.|.:...::.|..|..|:..:|||::|..||||||..:|.||||||:|...:.|:.:|.::
 Worm   595 RKQSTLALIFMLLSKACIQGSFNILYIFTSELNPTVVRNSAVGISSMVARMGAGASGYIAILSDV 659

  Fly   481 WRPL-PLIICGALSLTAGLLSLLLPETLNKPMPETI--------------------------EDG 518
            ..|| |:.|....||.||.|.||||||...|:|:||                          :|.
 Worm   660 TMPLVPMTIFACFSLLAGCLVLLLPETQGLPLPDTILDSVQMVKRNTKPCGTLSGTFLGGIDDDA 724

  Fly   519 ENFGKKPAP------QETAEEGGTQE 538
            :.:|.|..|      :|..||..::|
 Worm   725 QPYGGKLPPRVSSDDEEEEEEEDSEE 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 159/545 (29%)
MFS 135..491 CDD:119392 111/367 (30%)
oct-2NP_509899.3 MFS_SLC22 281..673 CDD:340875 122/400 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163021
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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