DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and F17C11.12

DIOPT Version :10

Sequence 1:NP_524479.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_505789.1 Gene:F17C11.12 / 179514 WormBaseID:WBGene00008923 Length:540 Species:Caenorhabditis elegans


Alignment Length:558 Identity:142/558 - (25%)
Similarity:246/558 - (44%) Gaps:114/558 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLL----AKPDFR-CALPYENGSIYELSP 63
            ||::    :.|.|.    .|||:...|....:|:...|:    |.|..: |.             
 Worm    34 DDLL----KMGRYS----ILLCIFVEVAMLSQLSNTMLMVYAGAAPTIKSCG------------- 77

  Fly    64 HLWNLSYPENER-CSYYDVDYTEEYLNGSIPRSSNETKTCSSYVYDRSKYLNSAVTE-WNLVCSR 126
               |:::..||. |.:|  .|.:|.               ....::|..|   .:|| :.|:|..
 Worm    78 ---NMTFSSNEEACLHY--SYCKEQ---------------KEMTFERQFY---GITEQFKLLCED 119

  Fly   127 SLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAPEYFSYTISRMIV 191
            :.|.....|:.||||:||.::|||:.|:.|||......|.:..|||:::|::.::..:||.|.|:
 Worm   120 AKLEKLGTSIQMLGVMLGCVVFGQIGDQYGRKTPMMFCLCMCFIFGIMSALSADFKKFTIFRTIL 184

  Fly   192 GATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIHDWRWLQIAI---TLP 253
            .....|...::.|..:|.:....|.:  ::..:.:|...:|....|:|...|..|.:.|   |:|
 Worm   185 CFFNGGQSTISVVYMIENIPKRTRGY--ISTLISYSPNVILLGILAFFFQQWDRLALVISFLTVP 247

  Fly   254 GLLFLCYYWIIPESARWLLMKGRKDEA---FVIIEK-----AAK---ENKVE--VPNEIYEQLVD 305
            .::.|.:   :.||.|||:.||:...|   |:.|||     |||   |.::|  :.||..:|:.|
 Worm   248 AIIMLAF---LHESPRWLMQKGQISHAKKVFLAIEKFDGVPAAKSLNETELENFLENEHDKQVAD 309

  Fly   306 EVAEKKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLVNF 370
            ...|..||.         :.:.|.:...:...|.:|.|.:|..:.:.|.:.:|...:.|:..:|.
 Worm   310 GNTEVGKQH---------SFWHLFKTKEIMTGTFVIAFTFFATTLINYSIMFNLGAVAGSIYMNS 365

  Fly   371 MISGAVEIPGYTLLLFT------LNRWGRRSILC-GTMMVAGISLLATI--FVPSDMN------- 419
            ::.|.:.   |:..||:      ..::.|:  :| |...|..||::..|  |..:|..       
 Worm   366 ILIGLLR---YSFSLFSGLLDYKFEKFDRK--MCHGICSVVTISIIVAIIAFCLTDTTATFSVLI 425

  Fly   420 --WLIVACAMIGKLAITSSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAP---YLKLLGE 479
              .::::|||..:..|.:|     |.|.|..||.:|::....:.:.:|.|.:.||   :|.|...
 Worm   426 RIGVLLSCAMTSQAIIVAS-----IASNELMPTAIRSISYSTAQLCSRFGIVFAPHVFHLNLYTG 485

  Fly   480 IWRP-LPLIICGALSLTAGL-LSLLLPETLNKPMPETI 515
            |..| ||..|..|:.|...: ...|:|||.|||:.:.|
 Worm   486 IDFPVLPYAILLAIGLADFIFFRFLIPETKNKPLEDFI 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_524479.1 2A0119 11..514 CDD:273328 139/548 (25%)
F17C11.12NP_505789.1 2A0119 <109..521 CDD:273328 119/435 (27%)

Return to query results.
Submit another query.