DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orct and svop-1

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_498960.2 Gene:svop-1 / 176250 WormBaseID:WBGene00014021 Length:520 Species:Caenorhabditis elegans


Alignment Length:426 Identity:103/426 - (24%)
Similarity:197/426 - (46%) Gaps:49/426 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 EWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAPEYFS 183
            ||.:   .|:..|...:....|::|.|..:|::.|:.||:.....|.::..|.||::.::|.::.
 Worm   113 EWGI---SSVQQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYV 174

  Fly   184 YTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIHD---WRW 245
            ....|.:.|....|| ..:..:..|.:.::.|....|.::.|:::|.:..|..|||:.:   ||.
 Worm   175 LLFFRGLTGFGIGGV-PQSVTLYAEFLPTAQRAKCVVLIESFWAIGAVFEALLAYFVMESFGWRA 238

  Fly   246 LQIAITLP-GLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLVDEVAE 309
            |....:|| |:..:..:| :|||||:.:..|..:.|...::.||:.|:|::|.   .:||...  
 Worm   239 LMFLSSLPLGIFAVASFW-LPESARFDMASGHPERALETLQAAARMNRVQLPT---GRLVSST-- 297

  Fly   310 KKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNL------------ 362
                  .|.|:....:.:||. |:||:.|:|::..|.:.:..|||:...|..|            
 Worm   298 ------KAGSESRGDIANLLS-PDLRKTTILLWCIWAITAFSYYGMVLFTTVLFQSHDECHGGLF 355

  Fly   363 -GGNQL-----------VNFMISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVP 415
             .|.|:           .:.:.:...|.||..:.:..:..:||:..:.....|..|......|..
 Worm   356 SNGTQMEVCQPLTRSDYFDLLSTTLAEFPGLIITVLIIEWFGRKKTMALEYAVFAIFTFLLYFCL 420

  Fly   416 SDMNWLIVACAMIGKLAITSSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYL-KLLGE 479
            .  .:.:.....:.:..|:.::...|:::.|.:||.:|.||||..|.:||:|.|:.|:: ::..|
 Worm   421 D--RFTVTVLIFVARAFISGAFQCAYVYTPEVYPTTLRAVGLGTCSAMARIGAIVTPFIAQVASE 483

  Fly   480 IWRPLPLIICGALSLTAGLLSLLLP-ETLNKPMPET 514
            ....||:.|.|..::...:.||.|| ||..:.|.::
 Worm   484 KSLSLPIGIYGTAAILGLIASLSLPIETKGRQMMDS 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 103/424 (24%)
MFS 135..491 CDD:119392 91/384 (24%)
svop-1NP_498960.2 2A0119 16..514 CDD:273328 102/419 (24%)
MFS 87..508 CDD:119392 98/413 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

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