DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and F23F12.3

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_498433.3 Gene:F23F12.3 / 175926 WormBaseID:WBGene00017751 Length:507 Species:Caenorhabditis elegans


Alignment Length:546 Identity:138/546 - (25%)
Similarity:237/546 - (43%) Gaps:116/546 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 IVCAFHKLAGVFLLAKPDFRCALPYENGSIYELSPHL------WNLSYPENERCSYYDVDYTEEY 87
            |:|.|....|:|      :.|.|.:.  ..|...|.|      :|.|.|   :|....|:...|.
 Worm    11 ILCFFLWQFGLF------YACQLIFP--IFYNFHPGLSCEDPGFNFSKP---KCKLSKVEICTEL 64

  Fly    88 LNGSIPRSSNETKTCSSYVYDRSKYLNSAVTEWNLVC-SRSLLSATSDSLFMLGVLLGSLIFGQM 151
                       |..||.:..:.:.: :|.|.::.:.| :::..||...::..:|.|:|:|::|.:
 Worm    65 -----------TANCSKWHIEPAPF-HSMVQDFKMFCGTKAYDSAWIATIQFIGALVGALVYGHL 117

  Fly   152 SDKLGRKPTFFASLVLQLIFGVLAAVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRL 216
            .|..||||..|..:.:.:||||.:..||.:..:.:...|.|.:.:.:.:|.|...||.:....|:
 Worm   118 GDHFGRKPVSFVGISIGIIFGVASGFAPSWEVFAVLLFICGTSVACIMIVFYAYILEFIEPEQRV 182

  Fly   217 FAGVAMQMFFSVGFMLTAGFAYFIHDWRWLQIAITLPGLLFLCYYW------------------- 262
            |    ::.||               :|.:.::..||  :.|:|.||                   
 Worm   183 F----LRTFF---------------NWGYARLVFTL--VCFICGYWRSAAIATSLLALPILPVLL 226

  Fly   263 IIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEI-YEQLVDEVAEKKKQDEMAASQPAATVF 326
            .:|||.:|...|.|..|.     |.| |.|:...:.| |.:..|...||.::.:    ....|:.
 Worm   227 WLPESPKWYATKNRFQEM-----KEA-EKKISWLSGISYVEREDRRTEKIEEKD----TKVYTIR 281

  Fly   327 DLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGN-QLVNFMISGAVEIPGYTLLLFTL-- 388
            ||.....:...|:::...||..|...:|...|:.||.|| .|..|:.:.|:.:...::.|..|  
 Worm   282 DLFSSWPIAYSTIVVGSLWFSTSVSSFGADLNSGNLAGNFYLSQFVQAAAIALSKLSIFLLDLFI 346

  Fly   389 ---NRWGRRSILCGTMMVAGISLLATIFVP-SD------MNWLIVACAMIGKLAITSSYGTIYIF 443
               ||.....:....|:....:::|.:..| ||      .|..|:...:||...|..::...|:.
 Worm   347 PSFNRQRLHQVPQIIMIACYTTIMALMISPDSDCSSQGSRNLAIIIINIIGTSFIELTWDACYLV 411

  Fly   444 SAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLP-LIICGALSLTAGLLSLL----- 502
            :||.|||.:|.:|:|..|::||:|.:|||.:..|.||:.|:| :|:|     :.|::|||     
 Worm   412 AAEIFPTRIRTIGIGTCSLLARIGALLAPQMAYLSEIYPPIPYIIVC-----SIGIISLLISCFF 471

  Fly   503 LPETL--------NKPMPETIEDGEN 520
            ||:|.        ..|:.|:   |:|
 Worm   472 LPDTKGVDLGALDRNPLEES---GDN 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 135/538 (25%)
MFS 135..491 CDD:119392 103/389 (26%)
F23F12.3NP_498433.3 Sugar_tr 76..485 CDD:278511 115/445 (26%)
MFS 97..>229 CDD:119392 35/152 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163008
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48025
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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