DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and Slc22a27

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_017173565.1 Gene:Slc22a27 / 171405 MGIID:3042283 Length:576 Species:Mus musculus


Alignment Length:550 Identity:153/550 - (27%)
Similarity:260/550 - (47%) Gaps:29/550 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDDVITHLGEFGPYQ-KRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPY-------ENGS 57
            |.:.:::..:|..|.:| .:|.:||.|.|||.. |.....|..|.|:.||.:|.       :|||
Mouse    26 MSFQELLNQVGSLGRFQILQIVFLLLLNAIVVP-HIAMENFTAAIPNHRCWVPILDNDTASDNGS 89

  Fly    58 IYELSPHLWNLSYP-----ENERC-SYYDVDYTEEYLNGSIPR-SSNETKTC-SSYVYDRSKYLN 114
            .......|..:|.|     ..|:| .:....:...:|||:... |..:|:.| ..:|||||.:|:
Mouse    90 RILSQDDLLRISIPLDSNLRPEKCRRFAQPQWHLLHLNGTFSNVSEPDTEPCVDGWVYDRSNFLS 154

  Fly   115 SAVTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAP 179
            :.||||:|||....|::.:...||:|:.:|.:|.|.:||:||||.....:|:...|.....|.||
Mouse   155 TIVTEWDLVCESQALNSVTKFSFMIGLFIGGIICGHLSDRLGRKFILTCALLQFAITETCVAFAP 219

  Fly   180 EYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIHDWR 244
            .:|.|...|.:.|.:...:.:.::::.||.....:.......:....::|:|::||.|:....|.
Mouse   220 SFFIYCSLRFLAGLSVEPILVNSHLLMLEWTSPKFLTMMAALLSCAPNIGYMISAGLAFLFRIWH 284

  Fly   245 WLQIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLVDEVAE 309
            .||:.:::|...||.....:.||||||::..:..:....:.|.|..|.::...:    |..|:..
Mouse   285 HLQLTMSVPIFFFLILTRWLSESARWLIVTNKPQKGLKELRKVAHMNGMKNSGD----LTMEIVR 345

  Fly   310 KKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGN-QLVNFMIS 373
            ...:.|:.|::...::.||.....||::..::.|.....:...:||:.:..:|..| .|:.|:||
Mouse   346 TSMKAELEAAKTKPSLRDLFHTSILRKRICVLSFMRLFFTVSIFGLAVHLQHLSSNIILLQFLIS 410

  Fly   374 GAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVACAMIGKLAITSSYG 438
             |:.|....:..|.||..|||......|.:.||.:|..:|||.:|..|.:..|.:.:...:...|
Mouse   411 -ALAILVSVIGPFVLNHIGRRITYLVLMSLRGIFILIAVFVPQEMQTLRIIMATLAEGISSLCVG 474

  Fly   439 TIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPLIICGALSLTAGLLSLLL 503
            ...:.:.|..||.:|...:|........|..|:|...||...:..:|.|..|..|:.......||
Mouse   475 VSRLHTNELLPTTLRATAVGVIGFFGNSGSFLSPLFMLLATYYANMPWIFYGGFSIFNAFTVFLL 539

  Fly   504 PETLNKPMPETIED-GENF-----GKKPAP 527
            |||.|:|:|::..| |.::     |||..|
Mouse   540 PETKNQPLPDSTHDVGNDWKESRKGKKEDP 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 146/519 (28%)
MFS 135..491 CDD:119392 91/356 (26%)
Slc22a27XP_017173565.1 MFS_OAT 134..540 CDD:340932 111/410 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843646
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.940

Return to query results.
Submit another query.