DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orct and svop

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_012825291.1 Gene:svop / 100492312 XenbaseID:XB-GENE-939906 Length:610 Species:Xenopus tropicalis


Alignment Length:459 Identity:121/459 - (26%)
Similarity:209/459 - (45%) Gaps:63/459 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 EWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAPEYFS 183
            ||.|   .|...|...|:..:|::..|.::|.:||:.||:.....|:...|.:|:|:|.||.|..
 Frog   176 EWRL---PSWQVALLTSVVFIGMMASSSLWGNVSDQYGRRTGLKISVFWTLYYGILSAFAPVYSW 237

  Fly   184 YTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIH---DWRW 245
            ..:.|.:||....|| ..:..:..|.:....|....:.:::|:::|.:.....|.|:.   .|||
 Frog   238 ILVLRGLVGFGIGGV-PQSVTLYAEFLPMKSRAKCILLIEVFWAIGTVFEVLLAIFVMPTLGWRW 301

  Fly   246 LQIAITLPGLLF--LCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLVDEVA 308
            |.|...||..||  ||::  :|||||:.::.|.:::|...:::.|.||...:|       :.::.
 Frog   302 LLILSALPLFLFAILCFW--LPESARYEVLSGNQEKALATLKRIATENGAPMP-------LGKLI 357

  Fly   309 EKKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLG--------GN 365
            ..:::|.       ..:.||.. |..||.|||::|.||.|:..||||...|..|.        .|
 Frog   358 VSRQEDR-------GKIRDLFS-PQFRRTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISN 414

  Fly   366 Q-------------------LVNFMISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLAT 411
            |                   ..:.:.:...|.||..:.|:.::|.||:..:....:|..:..| .
 Frog   415 QRKAVKPKCSLACEYLTVEDYTDLLWTTLSEFPGVLITLWIIDRVGRKKTMAICFIVFSLCAL-L 478

  Fly   412 IFVPSDMNWLIVACAMIGKLAITSSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYL-- 474
            :|:....|.|.| ...|.:..|:..:...|:::.|.:||..|.:|||..|.:||||.::.|::  
 Frog   479 LFLCVGRNVLTV-FLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQ 542

  Fly   475 -KLLGEIWRPLPLIICGALSLTAGLLSLLLP-ETLNKPMPETIEDGENFGKKPAPQETAEEGGTQ 537
             .|...|:  |.:::.....:.|.|.|..|| ||..:.:.|:  ....:|::...:.|...|.|.
 Frog   543 VMLESSIY--LTVLVYSGCCVLAALASCFLPIETKGRGLQES--SHREWGQEMEGRGTHNSGVTP 603

  Fly   538 ELSG 541
            ..||
 Frog   604 SNSG 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 114/430 (27%)
MFS 135..491 CDD:119392 102/390 (26%)
svopXP_012825291.1 MFS_SVOP 149..571 CDD:340999 110/419 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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