DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and LOC100490946

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_031756488.1 Gene:LOC100490946 / 100490946 -ID:- Length:517 Species:Xenopus tropicalis


Alignment Length:531 Identity:155/531 - (29%)
Similarity:254/531 - (47%) Gaps:39/531 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYELSPHLWNLSYPENERCS 77
            |.|:|..:..||..|......|....||..|.|.:.|     ..::....|.     ||| :.|:
 Frog    14 FSPFQAIMVTLLSAPLCFVGTHNFMPVFAAAVPPYNC-----RSNMTMDQPR-----YPE-DPCT 67

  Fly    78 YYDVDYTEEYLNGSIPRSSNETKTC-SSYVYDRSKYLNSAVTEWNLVCSRSLLSATSDSLFMLGV 141
            .|            :...||.||.| ..:.||.|.:.::.::||:|||.|..|...:.|::|.||
 Frog    68 QY------------VSSLSNSTKPCEEGWEYDHSIFTSTIISEWDLVCDRQTLKEVAQSVYMAGV 120

  Fly   142 LLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAPEYFSYTISRMIVGATTSGVFLVAYVIA 206
            |:|:.::|.::|:.||:.....||:.....|:..|::|....|.:.|.:.|....|:.:....:|
 Frog   121 LVGAAVYGALADRFGRRAMILCSLLQIAGMGIGVALSPNIIVYCLFRFLTGMGICGLIINDLGLA 185

  Fly   207 LEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIHDWRWLQIAITLPGLLFLCYYWIIPESARWL 271
            :|.....||....:......:.|.::..|.||.|..|||||:..:||..:|......:|||||||
 Frog   186 MEWTPRRYRPIVSMIQGYGLTCGAIILVGLAYAIRGWRWLQLTASLPYFIFFLLMCWVPESARWL 250

  Fly   272 LMKGRKDEAFVIIEKAAKEN--KVEVPNEIYEQLVDEVAEKKKQDEMAASQPAATVFDLLRYPNL 334
            .:|...::|...:.:.||.|  |...|      :..|:.:...|....|.....|..||.|.|.:
 Frog   251 SLKKHSNQALANLNRVAKINGRKEGGP------ITLEMLKLDDQHSTKAMTTKLTPLDLFRTPTM 309

  Fly   335 RRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLVNFMISGAVEIPGYTLLLFTLNRWGRRSILCG 399
            |..||::...||.:|..::.::.:.:..|.:..:...:....|:|...|...|....|||..:..
 Frog   310 RTITLILSLSWFSSSFGFFAIALDVDRFGLSLYLTQGVFAGSELPIRILATITAFYIGRRLTISF 374

  Fly   400 TMMVAGISLLATIFVPSDMNWLIVACAMIGKLAITSSYGTIYIFSAEQFPTVVRNVGLGASSMVA 464
            .::.||..||.|:.||.||..|.:...::.|.::.|.....|:::||.:|||:|..|||.::|:.
 Frog   375 LLIFAGTLLLCTMAVPKDMLLLQMILTVLAKASLGSCIVCSYLYTAEVYPTVLRQTGLGFTNMMM 439

  Fly   465 RVGGILAPYLKLLGEIWRPLPLIICGALSLTAGLLSLLLPETLNKPMPETIEDGE------NFGK 523
            |:|.|::|.:.:.......||::|...:.:.:||..||||||||.|:.:|:|:.|      ||..
 Frog   440 RLGAIISPLVMITRVYVSFLPMVIFAVMPIISGLPILLLPETLNCPLMDTVEEVESRNRELNFQI 504

  Fly   524 KPAPQETAEEG 534
            | .|:|.:..|
 Frog   505 K-IPKENSGPG 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 146/503 (29%)
MFS 135..491 CDD:119392 102/357 (29%)
LOC100490946XP_031756488.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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