DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and slc22a8

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_002937554.2 Gene:slc22a8 / 100490266 XenbaseID:XB-GENE-22061134 Length:556 Species:Xenopus tropicalis


Alignment Length:565 Identity:182/565 - (32%)
Similarity:301/565 - (53%) Gaps:39/565 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCA---LPYENGSI---- 58
            |.:.:::...|..|.:|.....|||.|.::.|.|.|...|..|.||.:|.   ..|::.|.    
 Frog     1 MSFAELLERTGGMGRFQITQVVLLCFPILLMASHNLLQNFSAAIPDHKCKANDTGYQSNSTDETG 65

  Fly    59 YELSPHLWNLSYP-----ENERC-SYYDVDYTEEYLNGSIPRSSN-ETKTCS-SYVYDRSKYLNS 115
            ||      .||.|     :.:|| .|.::.:.....|.:...||. .|:.|: .:.|.:.::.::
 Frog    66 YE------RLSAPLDANGQPDRCLEYVEIQWRMVGSNSTWNNSSELATRPCTIGWEYSKDEFSST 124

  Fly   116 AVTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAPE 180
            .:|||:|||.|......:.|::|.|||:|::|.|.:||:.||:.....|.....:.||.||.:|.
 Frog   125 IITEWDLVCGRKTRRQLAQSIYMGGVLVGAIILGGLSDRYGRRALLIWSYFQLAVSGVCAAFSPN 189

  Fly   181 YFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIHDWRW 245
            |.||.|.|.:.|...||:.|....:.:|.|.:..|...|......::.|.:|.||.||.:.||||
 Frog   190 YLSYCIFRFLTGMALSGIGLNTTALIVEWVPTRVRTVTGTLAGFSYTAGQLLLAGLAYGMRDWRW 254

  Fly   246 LQIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKEN--KVEVPNEIYEQLVDEVA 308
            ||:.::||..::..|.|..|||||||::.|:.::|...|.|.|..|  |.|......|.|..|:.
 Frog   255 LQLCVSLPFFIYFLYAWWFPESARWLVLSGKPEKAVKEIRKVANLNGKKEEGEKITLESLKSEMI 319

  Fly   309 EKKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLVNFMIS 373
            :     |:|:::.:.:|.||:|...:||.:..:...||..|..||||:.:......:..:..:|.
 Frog   320 K-----ELASAKSSYSVIDLVRTNTIRRISCALSLVWFSTSFAYYGLAMDLQKFNVSIYLIQVIF 379

  Fly   374 GAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVACAMIGKLAITSSYG 438
            |||:.|...:....:...||:.....::::.||:::|.||||:::..:..:.|:.||..:.:|:.
 Frog   380 GAVDFPAKLVSATAMIYVGRKFTQFMSLILGGIAIIANIFVPNELQTVRTSLAVFGKGCLAASFS 444

  Fly   439 TIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPLIICGALSLTAGLLSLLL 503
            .|::::.|.:|||:|..|||..|.:||:|||:||.:|:|||::..:||:|.|...:.:||....|
 Frog   445 CIFLYTTELYPTVIRQSGLGMCSTMARIGGIVAPLVKILGELYPFVPLLIYGGAPIISGLCVFFL 509

  Fly   504 PETLNKPMPETIED---GENFGKKPAPQETAEEGGTQELSGMLNG 545
            |||:|||:|:|||:   |.|     ||::..|:   .|:..:..|
 Frog   510 PETVNKPLPDTIEEVEKGIN-----APKKEIEK---NEMDSLKRG 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 171/519 (33%)
MFS 135..491 CDD:119392 122/357 (34%)
slc22a8XP_002937554.2 MFS_SLC22A6_OAT1_like 105..510 CDD:341004 135/409 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.140

Return to query results.
Submit another query.