DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and slc22a2

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_002933908.1 Gene:slc22a2 / 100487774 XenbaseID:XB-GENE-965056 Length:544 Species:Xenopus tropicalis


Alignment Length:538 Identity:190/538 - (35%)
Similarity:291/538 - (54%) Gaps:31/538 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYELSPHL-W 66
            :|:::.|:|||..:||:|:.|||..::|.:...:..|||...||:||.    :..|.|.|... |
 Frog     4 FDELLEHIGEFDAFQKQIFILLCFISVVFSPIYVGIVFLGFVPDYRCV----SAGIPEPSNECEW 64

  Fly    67 NLSY--PEN-------ERCSYYDVDYTEEYL---NGSIPRSSNETKTCSSYVYDRSKYLNSAVTE 119
            .|:|  |..       .:|..||||:....|   |.|:..:|....|.....:|.:...:|.|||
 Frog    65 TLNYTGPNGSTDSLYMSQCYQYDVDWNSTSLNCTNSSLNITSKLPITNCKDGWDYNTTGSSLVTE 129

  Fly   120 WNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAPEYFSY 184
            :||||..|.......|...:|..:|.||.|.::|:.||||...:|:::..|||:|.|.||.|...
 Frog   130 FNLVCGDSWKLDFFQSCVNIGFFIGGLISGYIADRFGRKPFLISSILITGIFGILMAFAPNYPLV 194

  Fly   185 TISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIHDWRWLQIA 249
            ...|.|.|..:.|.:|..|::..|.||..:|...|:..|..|:||.:|.:|.||.:..|||||:.
 Frog   195 VTFRFIQGFVSKGCWLSGYILVAEFVGLEHRRTVGIVYQAAFTVGLLLLSGVAYVLPHWRWLQMT 259

  Fly   250 ITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLVDEVAEKKKQD 314
            :|:|...||.|||.:|||.|||:.:.||.||..||...||:|...||         :..|....|
 Frog   260 VTIPYFFFLAYYWCVPESPRWLISQNRKAEAKAIIHTIAKKNGKMVP---------DFLESLTAD 315

  Fly   315 EMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLVNFMISGAVEIP 379
            |.|..:...:..||:|.|.:|:.||::.:.||..:.||.|...:..:...|...:|.||..||.|
 Frog   316 EEAGEKQVPSFLDLVRTPQIRKHTLILMYIWFTCAVVYQGSIMHMGSTAENIYFDFFISALVEFP 380

  Fly   380 GYTLLLFTLNRWGRRS--ILCGTMMVAGISLLATIFVPSDMNWLIVACAMIGKLAITSSYGTIYI 442
            ...|::.|::|.|||.  ::|  .::.||:.|.|.|:|...:|||:..:.:.::.||.||..:.:
 Frog   381 SAILIIVTVDRVGRRYPWLVC--CIITGITCLITAFIPHGYSWLIITLSCVSRMGITVSYEMVCL 443

  Fly   443 FSAEQFPTVVRNVGLGASSMVARVGGILAPYLKL-LGEIWRPLPLIICGALSLTAGLLSLLLPET 506
            .:||.:||.:||:|:...|.:..:||::.|::.. |..||:.||||:...|:..:|:|...||||
 Frog   444 VNAELYPTFIRNLGIMVCSSMCDLGGVITPFIVYRLAAIWQELPLIVFAVLATVSGILVYFLPET 508

  Fly   507 LNKPMPETIEDGENFGKK 524
            ..:.:|||||:.||..|:
 Frog   509 KGRALPETIEEAENLHKQ 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 181/518 (35%)
MFS 135..491 CDD:119392 129/358 (36%)
slc22a2XP_002933908.1 2A0119 12..516 CDD:273328 181/518 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11506
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

Return to query results.
Submit another query.