DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and slc22a13a

DIOPT Version :9

Sequence 1:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_021322911.1 Gene:slc22a13a / 100007819 ZFINID:ZDB-GENE-070912-473 Length:537 Species:Danio rerio


Alignment Length:549 Identity:160/549 - (29%)
Similarity:276/549 - (50%) Gaps:46/549 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYELSPHL-- 65
            :.:::..:|:||.:||.:.:.||.|.::..|...:.||..|..:..|...:    |.:..|:|  
Zfish     4 FGEILEAIGDFGLFQKLLLFALCFPNLILPFQLSSLVFNHADTNHHCNTDW----ILKADPNLTK 64

  Fly    66 ---WNLSYPE------NERCSYYDVDYT----EEYLNGSIPRSSNETKTCS-SYVYDRSKYLNSA 116
               .||:.|.      |....|..||:.    :||       ..|:|.||: .:|::.:.|..:.
Zfish    65 EEQLNLTLPRLSDGSFNPCQMYKPVDWNLSAIQEY-------GLNQTTTCTDGWVHNDTIYEATI 122

  Fly   117 VTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAPEY 181
            ||:::|||....:...:.::|..|||:|:::||..|:..|||......:||.|||.|:..::|.:
Zfish   123 VTDFDLVCENVNIFRGAQTVFFAGVLVGAILFGPFSESFGRKRATQIPMVLMLIFTVVTGLSPNF 187

  Fly   182 FSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIHDWRWL 246
            :.|.:|:.|.|....|..:.:.::|.|.:|.:.|.:|....|:..::|.::.....||:.|||..
Zfish   188 YVYLVSQFINGVGLGGFRINSIILASEWIGVAQRSYAACLSQVLAALGQVMFLAVVYFVRDWRLD 252

  Fly   247 QIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLVDEVAEKK 311
            |..:..|..:.:.|.|.:||||||||.:||..:|..:|:|||..||..||    |.||:||.::|
Zfish   253 QFIMAGPIGIVVIYIWFLPESARWLLDRGRTKDAKKLIQKAAAVNKRAVP----ESLVEEVLKEK 313

  Fly   312 KQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLVNFMISGAV 376
            ..::       ..:..|.....||:..|.|.|.|...:..||.||.|....|.:..:..:|.|..
Zfish   314 PVEK-------GGIKILFGSRVLRKYFLAITFAWCALNLAYYSLSLNVGKFGLDIFLTQLIFGLS 371

  Fly   377 EIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVACAMIGKLAITSSYGTIY 441
            |||.:.|.:::|...||:..|..::::.|...|.|:.||.:.:..|...|..|:..:.::.....
Zfish   372 EIPVHFLCMWSLEVVGRKPSLIVSLVLGGCLCLLTVAVPQNSSIAIAVLATCGRFLMNAAGSVCN 436

  Fly   442 IFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPLIICGALSLTAGLLSLLLPET 506
            ::..|.|||.:|....|..|..||.|.:|:|.:.:|......:|:::..:|:|.:|:.:.|||||
Zfish   437 VYFQELFPTSIRQTATGLGSTAARAGSMLSPVVNMLEIFHFSIPMVVISSLALASGVTAFLLPET 501

  Fly   507 LNKPMPETIEDGENFGKK------PAPQE 529
            ....:|.:.|:.|  ||:      ||.::
Zfish   502 RRTELPASTEEAE--GKRKPKLTSPATRD 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_001262908.1 2A0119 11..514 CDD:273328 154/518 (30%)
MFS 135..491 CDD:119392 109/355 (31%)
slc22a13aXP_021322911.1 Sugar_tr 12..507 CDD:331684 153/516 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588687
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.950

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