DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct and slc22a13a

DIOPT Version :10

Sequence 1:NP_524479.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_021322911.1 Gene:slc22a13a / 100007819 ZFINID:ZDB-GENE-070912-473 Length:537 Species:Danio rerio


Alignment Length:549 Identity:160/549 - (29%)
Similarity:276/549 - (50%) Gaps:46/549 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYELSPHL-- 65
            :.:::..:|:||.:||.:.:.||.|.::..|...:.||..|..:..|...:    |.:..|:|  
Zfish     4 FGEILEAIGDFGLFQKLLLFALCFPNLILPFQLSSLVFNHADTNHHCNTDW----ILKADPNLTK 64

  Fly    66 ---WNLSYPE------NERCSYYDVDYT----EEYLNGSIPRSSNETKTCS-SYVYDRSKYLNSA 116
               .||:.|.      |....|..||:.    :||       ..|:|.||: .:|::.:.|..:.
Zfish    65 EEQLNLTLPRLSDGSFNPCQMYKPVDWNLSAIQEY-------GLNQTTTCTDGWVHNDTIYEATI 122

  Fly   117 VTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLAAVAPEY 181
            ||:::|||....:...:.::|..|||:|:::||..|:..|||......:||.|||.|:..::|.:
Zfish   123 VTDFDLVCENVNIFRGAQTVFFAGVLVGAILFGPFSESFGRKRATQIPMVLMLIFTVVTGLSPNF 187

  Fly   182 FSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFIHDWRWL 246
            :.|.:|:.|.|....|..:.:.::|.|.:|.:.|.:|....|:..::|.::.....||:.|||..
Zfish   188 YVYLVSQFINGVGLGGFRINSIILASEWIGVAQRSYAACLSQVLAALGQVMFLAVVYFVRDWRLD 252

  Fly   247 QIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLVDEVAEKK 311
            |..:..|..:.:.|.|.:||||||||.:||..:|..:|:|||..||..||    |.||:||.::|
Zfish   253 QFIMAGPIGIVVIYIWFLPESARWLLDRGRTKDAKKLIQKAAAVNKRAVP----ESLVEEVLKEK 313

  Fly   312 KQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLVNFMISGAV 376
            ..::       ..:..|.....||:..|.|.|.|...:..||.||.|....|.:..:..:|.|..
Zfish   314 PVEK-------GGIKILFGSRVLRKYFLAITFAWCALNLAYYSLSLNVGKFGLDIFLTQLIFGLS 371

  Fly   377 EIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVACAMIGKLAITSSYGTIY 441
            |||.:.|.:::|...||:..|..::::.|...|.|:.||.:.:..|...|..|:..:.::.....
Zfish   372 EIPVHFLCMWSLEVVGRKPSLIVSLVLGGCLCLLTVAVPQNSSIAIAVLATCGRFLMNAAGSVCN 436

  Fly   442 IFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPLIICGALSLTAGLLSLLLPET 506
            ::..|.|||.:|....|..|..||.|.:|:|.:.:|......:|:::..:|:|.:|:.:.|||||
Zfish   437 VYFQELFPTSIRQTATGLGSTAARAGSMLSPVVNMLEIFHFSIPMVVISSLALASGVTAFLLPET 501

  Fly   507 LNKPMPETIEDGENFGKK------PAPQE 529
            ....:|.:.|:.|  ||:      ||.::
Zfish   502 RRTELPASTEEAE--GKRKPKLTSPATRD 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OrctNP_524479.1 2A0119 11..514 CDD:273328 154/518 (30%)
slc22a13aXP_021322911.1 2A0119 12..507 CDD:273328 153/516 (30%)

Return to query results.
Submit another query.