DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and SV2A

DIOPT Version :10

Sequence 1:NP_651238.2 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_055664.3 Gene:SV2A / 9900 HGNCID:20566 Length:742 Species:Homo sapiens


Alignment Length:671 Identity:124/671 - (18%)
Similarity:212/671 - (31%) Gaps:244/671 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EAIIHLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALPFENGSSYDLPTHLWNLS 69
            |||:.....||:|..:||::             |:.|:|                          
Human   153 EAILRECGHGRFQWTLYFVL-------------GLALMA-------------------------- 178

  Fly    70 YPENERCSYYDVDYTEEYLNGSIPRSSNETKTCSSYVYDRSKYLNSAVTEWNLVCGRDFMAATSD 134
                        |..|.::.|.:..|: |...|.|   |.:|.:...:.                
Human   179 ------------DGVEVFVVGFVLPSA-EKDMCLS---DSNKGMLGLIV---------------- 211

  Fly   135 SLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAPEYFTYTFARLMVGATTSGVF 199
               .||:::|:.::|.|:|:.||:..|..||.:..:|...:.....|.|:.|.||:.|....|..
Human   212 ---YLGMMVGAFLWGGLADRLGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSI 273

  Fly   200 LVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVF----------------AYFVHDWRWLQI 248
            .:.:....|.:..:||.....::.||:.:|.:..|..                ||..|.||...:
Human   274 PIVFSYFSEFLAQEKRGEHLSWLCMFWMIGGVYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVL 338

  Fly   249 ALTLPGLIFMFYYWIIPESARWLLLKGRKDCA--------IANMQ---------KAARFNKVEIS 296
            ....|.:..:......|||.|:.|..|:.|.|        ..||:         .......:...
Human   339 VCAFPSVFAIGALTTQPESPRFFLENGKHDEAWMVLKQVHDTNMRAKGHPERVFSVTHIKTIHQE 403

  Fly   297 DEALSELLDEGENSEEKAKQKLEDQELDEGPPPSVWDLF--CY-PNLRRKTLLIFLDWLVTSGVY 358
            ||.:....|.|     ...|:...:.|..|  ..||..|  |: |..||.||::...|...|..|
Human   404 DELIEIQSDTG-----TWYQRWGVRALSLG--GQVWGNFLSCFGPEYRRITLMMMGVWFTMSFSY 461

  Fly   359 YGLS-W-----------------------------------NTSNLGGN---------------- 371
            |||: |                                   |..:.||.                
Human   462 YGLTVWFPDMIRHLQAVDYASRTKVFPGERVEHVTFNFTLENQIHRGGQYFNDKFIGLRLKSVSF 526

  Fly   372 -----------------------VLLNFV-------------------------------ISGAV 382
                                   ..:|.|                               ::|..
Human   527 EDSLFEECYFEDVTSSNTFFRNCTFINTVFYNTDLFEYKFVNSRLINSTFLHNKEGCPLDVTGTG 591

  Fly   383 E----------------IPAYIFLLLTLNRWGRRSILCGCLVMAGLSLLATVIIPQRMHTLIVAC 431
            |                :|..|...|.:::.||..:|.|..||:.:|.. .:........:|...
Human   592 EGAYMVYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVMSCVSCF-FLSFGNSESAMIALL 655

  Fly   432 AMLGKLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMM--APFLNFLATIWKPLPLLI 494
            .:.|.::| ||:..:.:.:.|.:|:..|..|.|..:.:.:::.::  :.|.:|:. |.|..|:|.
Human   656 CLFGGVSI-ASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFTSFVG-ITKAAPILF 718

  Fly   495 CGSLTLVAGLLSLLLPETHNK 515
            ..:...:...|:|.||||..:
Human   719 ASAALALGSSLALKLPETRGQ 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_651238.2 2A0119 11..520 CDD:273328 121/665 (18%)
SV2ANP_055664.3 synapt_SV2 1..742 CDD:130366 124/671 (18%)
Interaction with SYT1. /evidence=ECO:0000250 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..144
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.