DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and HXT9

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_012316.1 Gene:HXT9 / 853236 SGDID:S000003755 Length:567 Species:Saccharomyces cerevisiae


Alignment Length:501 Identity:109/501 - (21%)
Similarity:186/501 - (37%) Gaps:150/501 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 ETKTCSSYV------------YDRSKYLNSAVTEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQ 150
            :|.|.|.:|            .|:..|..|.|....:|           |:|.:|..:|.||..:
Yeast    78 DTGTISGFVNLSDFIRRFGQKNDKGTYYLSKVRMGLIV-----------SIFNIGCAIGGIVLSK 131

  Fly   151 LSDKYGRKPILFASLVIQVLFGVLAGVAP--EYFTYTFARLMVGATTSGV-----FLVAYVVAME 208
            :.|.|||:..|.....|.|: |:|..:..  :::.|...|::.|....|:     .|::.|...:
Yeast   132 VGDIYGRRIGLITVTAIYVV-GILIQITSINKWYQYFIGRIISGLGVGGIAVLSPMLISEVAPKQ 195

  Fly   209 MVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVHD------WR--------WLQIALTLPGLIFMF 259
            :.|...:||     .:..::|..|.....|...:      ||        |....::  |::|  
Yeast   196 IRGTLVQLY-----QLMCTMGIFLGYCTNYGTKNYHNATQWRVGLGLCFAWTTFMVS--GMMF-- 251

  Fly   260 YYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLDEGENSEEKAKQKLEDQELD 324
                :|||.|:|:..|:.:.|..::.|:   |||.:.|.||.     .|....||     ..||:
Yeast   252 ----VPESPRYLIEVGKDEEAKRSLSKS---NKVSVDDPALL-----AEYDTIKA-----GIELE 299

  Fly   325 EGPPPSVWDLFCYPNLRRKTLL---IFLDWLVTS---------GVYYGL----------SWNTSN 367
            :....:.|...    |..||.:   :.:..::.|         ..|||.          |:.|| 
Yeast   300 KLAGNASWSEL----LSTKTKVFQRVLMGVMIQSLQQLTGDNYFFYYGTTIFKSVGLKDSFQTS- 359

  Fly   368 LGGNVLLNFVISGAVEIPAYIFLLLTLNRWGRR--------SILCGCLVMAGLSLLATVIIPQ-R 423
                     :|.|.|...:....:.|:.|:|||        |:||...|.|.:.:  |.:.|| .
Yeast   360 ---------IIIGVVNFFSSFIAVYTIERFGRRTCLLWGAASMLCCFAVFASVGV--TKLWPQGS 413

  Fly   424 MHTLIVA-----CAMLGKLAITASYGTV-----YIFSAEQFPTVVRNVALGAASMVARISGMMAP 478
            .|..|.:     |.::..:....|:.|.     |:..:|.||..|::..:..|:....:.|    
Yeast   414 SHQDITSQGAGNCMIVFTMFFIFSFATTWAGGCYVIVSETFPLRVKSRGMAIATAANWMWG---- 474

  Fly   479 FLNFLATIWKPLPLLICGSLTLVAGLLSL------------LLPET 512
               ||.:.:.|   .|.|::....|.:.|            .:|||
Yeast   475 ---FLISFFTP---FITGAINFYYGYVFLGCLVFAYFYVFFFVPET 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 109/501 (22%)
MFS 127..503 CDD:119392 95/437 (22%)
HXT9NP_012316.1 Sugar_tr 64..526 CDD:395036 109/501 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.