DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and GIT1

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_010022.1 Gene:GIT1 / 850462 SGDID:S000000695 Length:518 Species:Saccharomyces cerevisiae


Alignment Length:513 Identity:88/513 - (17%)
Similarity:160/513 - (31%) Gaps:170/513 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 NERCSYYDVDYTEEYLNGSIPRSSNETKT-------------CSSYVYDRSKYLNSAVTEWNLVC 124
            |.|...||.:           |.:..|:|             .|.:......|:|.:::..|.|.
Yeast    19 NPRIIKYDAE-----------RRATRTETSKKDKWKNIVTIIASGFALISDGYVNGSMSMLNKVF 72

  Fly   125 GRDF--------MAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLA------ 175
            ..::        ::....:..::|::.|....|..:|.|.||..:..:..|.|:...|.      
Yeast    73 VMEYGKKNYSSKVSTRVSNAALVGIIFGQFFMGIAADYYSRKSCILVATAILVIGSALCAASHGT 137

  Fly   176 ------------------GVAPEYFTYTF-----ARLMVGATTSGVFLVAYVVAMEMVGPDKRLY 217
                              ||..||.|.|.     |.........|:.::...:.:...||...: 
Yeast   138 TVPGMFWMLTVMRGLVGIGVGAEYPTSTLSANESANEYTTTKRGGILVMVTNLPLAFGGPFATI- 201

  Fly   218 AGIFVMMF----------------FSVG-FMLTAVFAYFVHDWRWL----------QIALTLPGL 255
              ||::::                |::| |...:|| ||    ||.          :|...:|..
Yeast   202 --IFLIVYKICSGTKHLEAIWRTVFAIGCFWPLSVF-YF----RWKTATTEVYEKGRIKRNIPYF 259

  Fly   256 IFMFYYW--IIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLDEGENSEEKAKQKL 318
            :.:.:||  ::.....|.            |.....|.....|...:|.::.: :|...|..:  
Yeast   260 LALKFYWKRLLGTCGTWF------------MYDFVTFPNGIFSSTIISSVIKD-QNDLVKVAE-- 309

  Fly   319 EDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGGNVLLNFVISGAVE 383
                         |:|             .|..|...||..| ::.:..:|....|.|..||   
Yeast   310 -------------WNL-------------LLGVLAVLGVPIG-AYLSDRIGRKYTLMFGFSG--- 344

  Fly   384 IPAYIFLLLTLNRWGRRSILCGCLVMAGLSLLATVIIPQRMHTLIVACAMLGKLAITASYGTVYI 448
               ||..          .::.||         |...:.:.....|:..|.:..|........:.:
Yeast   345 ---YIIF----------GLIIGC---------AYDQLKKITPLFIIFYAFMNMLGNAGPGDMLGV 387

  Fly   449 FSAEQFPTVVRNVALGAASMVARISGMMA-----PFLNFLATIWKPLPLLICGSLTLV 501
            .|:|...|.||.|..|.:::..:|..::.     |..:.|...|..:...|||.:.::
Yeast   388 ISSEASATAVRGVFYGLSAVTGKIGSVVGVECFQPIRDNLGARWTFIIAAICGLIGII 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 88/513 (17%)
MFS 127..503 CDD:119392 76/446 (17%)
GIT1NP_010022.1 MFS_PhT 48..454 CDD:340922 81/473 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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