DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and OCT5

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_178059.1 Gene:OCT5 / 844279 AraportID:AT1G79410 Length:515 Species:Arabidopsis thaliana


Alignment Length:536 Identity:128/536 - (23%)
Similarity:222/536 - (41%) Gaps:83/536 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LGDFGRYQKIIYFLICLTSIPVAFHK---LAGVFLLAKPDFRCALPFENGSSYDLPTHLWNLSYP 71
            |.|||..|   :..|.|..:.:.|..   ...||..|.|.:.|.                     
plant    33 LSDFGFSQ---FLQIVLVGLALTFDSQQIFITVFTDAYPTWHCL--------------------- 73

  Fly    72 ENERCSYYDVDYTEEYLNGSIPRSSNETKTCSSYVYDRSKYLNSAVTEWNLVCGRDFMAATSDSL 136
            ::..|:....|..:      |||        |::.:|......|.::|::|.|...|:.:...|.
plant    74 DHTICNPATTDICK------IPR--------SAWDWDGGFKGKSVISEFDLECSSSFLRSLPSST 124

  Fly   137 FMLGVLLGSIVFGQLSD-KYGRKPILFASLVIQVLFGVLAGVAPEYFTYTFARLMVGATTSGVFL 200
            |.:|.::|.:|...:.| ..|||.:||.|.....|.|:...::...:.|:|.:.::|...|....
plant   125 FYVGSIVGGVVLAMIPDGSLGRKQLLFFSSFAMSLTGISIFLSSNIWIYSFLKFVIGFARSQTGT 189

  Fly   201 VAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVH--DWRWLQIALTLP-GLIFMFYYW 262
            .|.|:..|.:....|..|.:.....|.:|||..:..||.|.  .|:.|.:..::| |:..:|.|:
plant   190 YALVLISERISTKWRPRATMVPFTLFVLGFMSLSGIAYLVRHASWKVLYLCTSIPAGIHSIFIYF 254

  Fly   263 IIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLDEGENSEEKAKQKLEDQELDEGP 327
            ...||.|||.|:|:...||..:::.:..|:..:  |::|..|...|..|:.:..           
plant   255 FALESPRWLHLEGKNKEAIEVLKRISPANRGYL--ESVSSRLRPKETLEQTSSY----------- 306

  Fly   328 PPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGGNVLLNFVISGAVEIPAYIFLLL 392
              |:.|||......|:..|:.:........|||:.....::..|:.::..::..||:|.::...:
plant   307 --SIKDLFIIKWAFRRVTLVMIIMFGLGMSYYGVPLAVRDIKVNIYMSEALNAMVELPTFVVTPI 369

  Fly   393 TLNRWGRR-SILCGCLVMAGLSLLATVIIPQRMHTLIVA-------CAMLGKLAITASYGTVYIF 449
            .|.::.|| |:|..||:.....:|..|:.......:..|       ||.:|       :..:.|:
plant   370 LLEQFSRRSSVLVNCLIGGASGVLCFVMSLYGRTKIAFALELGSFFCARIG-------FNLMAIY 427

  Fly   450 SAEQFPTVVRNVALGAASMVAR----ISGMMAPFLNFLATIWKPLPLLICGSLTLVAGLLSLLLP 510
            ..|.|||.|||    :|:|:.|    :.|...|.:..|......|...:.|......||.:||||
plant   428 LVELFPTCVRN----SATMMLRQALVVGGACCPLIASLGRNVPSLSFAVFGFAMSGLGLFALLLP 488

  Fly   511 ETHNKPMLETIADGER 526
            ||....:.:|:.:.|:
plant   489 ETKGLSLCDTMEEQEQ 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 125/527 (24%)
MFS 127..503 CDD:119392 94/391 (24%)
OCT5NP_178059.1 MFS_OCT_plant 83..488 CDD:340936 108/444 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704438at2759
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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