DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and OCT4

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_188702.2 Gene:OCT4 / 821613 AraportID:AT3G20660 Length:526 Species:Arabidopsis thaliana


Alignment Length:528 Identity:167/528 - (31%)
Similarity:253/528 - (47%) Gaps:76/528 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 HLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALPFENGSSYDLPTHLWNLSYPEN 73
            :.|:|||:|...:.|.|:.....|||.:..:|...:|::||.     ||                
plant    41 YCGEFGRWQLKHFVLTCIAWALEAFHTMVMIFADQEPEWRCV-----GS---------------- 84

  Fly    74 ERCSYYDVDYTEEYLNGSIPRSSNETKTCSSYVYDRSKYLNSAVTEWNLVCGRDFMAATSDSLFM 138
                    |.....||..:..||.|......         :|.|:||.|:||..:......:||.
plant    85 --------DCRVGSLNCELDPSSWEWTAGKG---------SSTVSEWGLICGDKYKVGLVQALFF 132

  Fly   139 LGVLLGSIVFGQLSD-KYGRKPILFASLVIQVLFGVLAGVAPEYFTYTFARLMVGATTSGVFLVA 202
            .|.::|:.|||.||| |.|||..|....:|..:||:....:|.|:||...|.:.|.:|.||.|.|
plant   133 AGCMIGAGVFGHLSDSKLGRKGSLTVVCIINAIFGIATAFSPNYWTYVVLRFLTGFSTGGVGLTA 197

  Fly   203 YVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVHDWRWLQIALTLPGLIFMFYYWIIP-- 265
            :|:|.|.:||.||..||:....|||.|..:.:..||....||.|.|..:||.|:|:..  :||  
plant   198 FVLATEPIGPSKRGVAGMSTFYFFSAGIAVLSGIAYVFRSWRELFIVSSLPSLLFLLI--VIPFI 260

  Fly   266 -ESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLDEGENSEEKAKQKLEDQELDEGPPP 329
             ||.||.|::|:.|.|:..|...|:.|...|.......|.|:.||:..:....:|.         
plant   261 SESPRWYLVRGKVDEAMKLMHSIAKTNGRHIPAGVTLALDDDVENNNGERNTAVEG--------- 316

  Fly   330 SVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGGNVLLNFVISGAVEIPAYIFLLLTL 394
            |:.|:...|.:|.:.::........|.||||||.|..||..|:.||..::...|:||:....:.|
plant   317 SLKDVILSPLMRMRLVISVAISFTVSIVYYGLSLNVGNLKTNLYLNVFVNAVSEMPAFAITAVLL 381

  Fly   395 NRWGRRSILCG--------CLVMAGLSLLATVIIPQRMHTLIVACAMLGKLAITASYGTVYIFSA 451
            :::||:.:..|        |||  |.|:....  |.:  ::.:...:||...:..:|..::|:.|
plant   382 DKYGRKPLSIGTQWFSCVFCLV--GFSVWGAG--PWK--SVRMVSGVLGIFGMAGTYNLLFIYIA 440

  Fly   452 EQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKPLP---LLICGSLTLVAGLLSLLLPETH 513
            |.|||||||.|||.|:..|::..::||   |:..:.:.||   ..:||   ||.|.|:..||||.
plant   441 ELFPTVVRNAALGCATQAAQMGAILAP---FVVVLGEELPFGVFAVCG---LVGGGLAFYLPETL 499

  Fly   514 NKPMLETI 521
            |||:.:|:
plant   500 NKPLYDTM 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 166/523 (32%)
MFS 127..503 CDD:119392 128/390 (33%)
OCT4NP_188702.2 MFS_OCT_plant 90..496 CDD:340936 142/437 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 225 1.000 Domainoid score I682
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H80237
Inparanoid 1 1.050 252 1.000 Inparanoid score I1021
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 1 1.000 - - mtm8406
orthoMCL 1 0.900 - - OOG6_100389
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.960

Return to query results.
Submit another query.