DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and slc22a21

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001295487.1 Gene:slc22a21 / 799908 ZFINID:ZDB-GENE-091118-62 Length:546 Species:Danio rerio


Alignment Length:541 Identity:190/541 - (35%)
Similarity:298/541 - (55%) Gaps:46/541 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YDEAIIHLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALPFENGSSYDLPTHLWN 67
            |:|....||.:|.:||.::.|:||:.||..|..|:.|||...|...|.:|    .:.:|.....|
Zfish     6 YEEQTAFLGAWGPFQKTVFSLLCLSIIPNGFTGLSIVFLGDTPAHHCRIP----ETLNLTAGWRN 66

  Fly    68 LSYPENE--------RCSYYDVDYTEEYLNG-----------SIPRSSNETKTCSSYVYDRSKYL 113
            .|.|..:        ||....:|..:.|.:|           .|||.    :....::||:..|.
Zfish    67 ASVPRPQPHGDPRASRCYRLRLDLVKNYSDGGLLPGLDVNVSEIPRE----ECADGWIYDKEIYS 127

  Fly   114 NSAVTEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVA 178
            ::.|:||:|||..|:.:..:.|:|..|||.||::.|.:||::|||.:||.::.||.||.|:...:
Zfish   128 STIVSEWDLVCSDDWKSPLTSSIFFCGVLTGSVISGPVSDRFGRKIVLFVTMAIQTLFTVVQVFS 192

  Fly   179 PEYFTYTFARLMVGATTSGVFLVAYVVAMEMVGPDKR-LYAGIFVMMFFSVGFMLTAVFAYFVHD 242
            |.:..:.|...:||......::.|:|:.||::....| :|:.:.|.:|||:|:|:..:.|:|:.|
Zfish   193 PSWQIFCFLFFIVGMGQISNYVAAFVLGMEILSSSVRDVYSTLGVCLFFSIGYMILPLAAFFLRD 257

  Fly   243 WRWLQIALTLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLDEG 307
            ||.|.:|||:||..::..:|.||||.||||.:||...|.|.::|||:.|:|...| .:..|:...
Zfish   258 WRSLMLALTIPGFFYIPLWWFIPESPRWLLSQGRVQEAEAIIRKAAKINRVTAPD-VIFPLMQST 321

  Fly   308 ENSEEKAKQKLEDQELDEGPPP--SVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGG 370
            |               |.|...  ||.:|....|:|..|.|:.|.|:..|..|..||.|||:|.|
Zfish   322 E---------------DAGGVQSFSVCELLKSSNIRYMTGLLCLIWMAVSIGYCALSLNTSSLHG 371

  Fly   371 NVLLNFVISGAVEIPAYIFLLLTLNRWGRRSILCGCLVMAGLSLLATVIIPQRMHTLIVACAMLG 435
            |:.||.::|..||:||.:...|.|....||..|...|.:.||.||..::||:...::.:|..|||
Zfish   372 NIYLNCLLSAVVEVPALLMAWLMLRLAPRRHCLASTLALGGLVLLLILLIPEDQSSVTLALVMLG 436

  Fly   436 KLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKPLPLLICGSLTL 500
            |..::|::..:|..:||.:|||:||.||||.||.:|:.|:.||:.|:|.:..:.||.::.|.:.:
Zfish   437 KFGLSAAFSIIYPVTAELYPTVLRNTALGACSMSSRVGGISAPYFNYLGSYHRSLPYILIGGINV 501

  Fly   501 VAGLLSLLLPETHNKPMLETI 521
            ::||||.||||:....:.|||
Zfish   502 LSGLLSFLLPESRGSALPETI 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 184/530 (35%)
MFS 127..503 CDD:119392 138/378 (37%)
slc22a21NP_001295487.1 2A0119 14..521 CDD:273328 184/530 (35%)
MFS 146..511 CDD:119392 142/380 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588411
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100389
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.840

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