DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and oct2

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001107932.1 Gene:oct2 / 797890 ZFINID:ZDB-GENE-080204-92 Length:554 Species:Danio rerio


Alignment Length:579 Identity:169/579 - (29%)
Similarity:281/579 - (48%) Gaps:53/579 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YDEAIIHLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRC---ALPFENGSSYDLPTH 64
            :||.:.|.||||.|||.|..|..|..:.:||..:..|||...||..|   :|..:.|.|.:   .
Zfish     4 FDELLQHAGDFGFYQKRISVLGSLPILLLAFVLIGVVFLGYTPDHWCKTASLQEKCGFSEE---Q 65

  Fly    65 LWNLSYPEN------ERCSYYDVDYTEEYLNGSIPRSSNETKTCSSYVYDRSKYLNSA------- 116
            :.:|:.|..      .:|    |.:.:...|||       ..:|:..:::.|.:|::.       
Zfish    66 VRDLTVPRTGARGAFSKC----VKFDDALRNGS-------ALSCNISIFNNSTHLSACNEGWTFN 119

  Fly   117 ------VTEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLA 175
                  |||::|||...::|..:......|..:|::|.|.|:|::|||....||:....:.|...
Zfish   120 ENRTTIVTEFSLVCEDSWLADLNQVSLAGGFFIGALVTGYLADRFGRKSCFIASIFGLGVSGTCI 184

  Fly   176 GVAPEYFTYTFARLMVGATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFV 240
            ..:|.|....|.|.:.|....|.:...||:.:|..|.:.|.:..:....|:|:|.:|....||::
Zfish   185 IFSPYYPLLLFFRCLQGFFAKGAWTATYVLIIEFFGSNNRKFVSVMSRTFYSLGLVLLPALAYYI 249

  Fly   241 HDWRWLQIALTLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLD 305
            ..||.||:|:|||..||:.|:|:||||.||||.:.:...|::.::..|:.||     .:|.|...
Zfish   250 PSWRNLQLAMTLPTFIFLIYHWVIPESPRWLLSQRKTKEALSIVKSIAKCNK-----RSLPEDFH 309

  Fly   306 EGENSEEKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGG 370
            |.:...||.::.:.         ||..|||..|.:|:.|.::...|...:.|:.||.......|.
Zfish   310 EMDLLIEKQEEIMR---------PSYKDLFKTPKMRKHTFILIYAWFTGAVVFQGLVLRLGITGD 365

  Fly   371 NVLLNFVISGAVEIPAYIFLLLTLNRWGRRSILCGCLVMAGLSLLATVIIPQRMHTLIVACAMLG 435
            ||.|:|:||..||:|..:.....::|.|||.::.....:.|.:.||...|...:..|....|::|
Zfish   366 NVFLDFLISAVVELPTGLIFYFLVDRIGRRPLMATVNFIGGAACLAVPFISPNISWLRRTIAIVG 430

  Fly   436 KLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNF-LATIWKPLPLLICGSLT 499
            :||:.....||...:.|.:||.:||:.:...|..:.|..::|||:.: ||:||:.||||:.|.::
Zfish   431 RLAVAIGNETVNFANTELYPTPLRNLGVSVCSSASDIGAVVAPFILYRLASIWQELPLLVYGVMS 495

  Fly   500 LVAGLLSLLLPETHNKPMLETIADGERFGKKTKADVYLETGQELRAPEAQPLKGSGETN 558
            ::...|.:||||.....:.||:.|.|....:.|...  :.|.:.......|:|...:|:
Zfish   496 VLYSGLVMLLPEMKGVDLPETVDDVENLRSRHKRKE--KDGAQFPEINIVPMKAVEKTS 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 157/531 (30%)
MFS 127..503 CDD:119392 115/376 (31%)
oct2NP_001107932.1 2A0119 12..516 CDD:273328 157/531 (30%)
MFS 123..506 CDD:119392 123/396 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588703
Domainoid 1 1.000 280 1.000 Domainoid score I1640
eggNOG 1 0.900 - - E33208_3B9N9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.850

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