DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and Slc22a16

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_081848.1 Gene:Slc22a16 / 70840 MGIID:1918090 Length:649 Species:Mus musculus


Alignment Length:576 Identity:180/576 - (31%)
Similarity:286/576 - (49%) Gaps:63/576 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 HLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALP-------FENGSSYDL----- 61
            |:|.|||:|.::|.:....|:....|.|:.|||...|:..|..|       |.|.|::.|     
Mouse    12 HIGHFGRFQIVLYLICAYQSLSCGIHYLSSVFLSIIPEHACKPPGMVRKAVFHNVSAWRLEDILA 76

  Fly    62 ---PTH------------LWNLSYPENERCSYYDVDYTEEYLNGSIPRSSNETKTCSSYVYDRSK 111
               |.|            :|.|:     |||....:.| .:|........:::.....||||:||
Mouse    77 LRSPEHKDHIMVELQDGEIWELT-----RCSRTWRENT-SHLGYEYSGYKHDSPCFDGYVYDQSK 135

  Fly   112 YLNSAVTEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAG 176
            :.||||..:||||.:.:.|.....|.:.||:||||.|..|||::||:..|:.:.:....||:.:.
Mouse   136 WRNSAVRNFNLVCDQKWYARMIQPLIIFGVMLGSITFSYLSDRFGRRMALWCTSIGVFFFGIASL 200

  Fly   177 VAPEYFTYTFARLMVGATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVH 241
            ...:|.::...|..:...:||.|:|.:|..||::|...|.:|.|.:..||::|.||.|:.:|.:.
Mouse   201 FIFDYLSFMITRFFLVMASSGYFVVVFVYVMEIIGKKARTWASIHLNTFFAIGAMLVALASYLLK 265

  Fly   242 DWRWL-QIALTLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLD 305
            .| || ||.|.:....|:...|::||:..|||.:||...|...:...|.:||....|  |.|||.
Mouse   266 TW-WLYQIILCIVTTPFILCCWMLPETPFWLLSEGRYKEAQGTVDTMAVWNKSSSCD--LVELLS 327

  Fly   306 -EGENSEEKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLG 369
             :...|..|:...:....|.        |||...::.:.||:::|||...:..||..........
Mouse   328 LDVTRSHNKSPHSIRKHRLA--------DLFHNLDVAKMTLIVWLDWFTANLGYYMFGKEVIRRK 384

  Fly   370 GNVLLNFVISGAVEIPAYIFLLLTLNRWGRRSILCGCLVMAGLSLLATVIIPQRMHTLIVACAML 434
            .|..|..::.||:||||||.|.:.|.|.|||..:...|:::.|:.:..|::|....|.....|:|
Mouse   385 ENEPLYLLLVGAMEIPAYICLCIWLKRVGRRKTMLLFLLVSSLTCMLHVVMPSDYKTAKRMVALL 449

  Fly   435 GKLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKPLPLLICGSLT 499
            .|..|::.:..:|:::||.:||.||.:|:|:::||:.:|.:..||.:..:.:|..||.::.|.|.
Mouse   450 VKSVISSVFAFIYLYTAELYPTTVRCLAVGSSNMVSHVSSIFIPFTSHFSKVWIFLPQILFGILA 514

  Fly   500 LVAGLLSLLLPETHNKPMLETIADGERFGKKTKADVYLETGQELRAPEAQPLKGSG 555
            :::|||||.||||.:.||..|                .|| .|.:.||.:...|.|
Mouse   515 ILSGLLSLKLPETQDTPMKST----------------WET-TEQQVPENKDSLGEG 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 171/537 (32%)
MFS 127..503 CDD:119392 118/377 (31%)
Slc22a16NP_081848.1 2A0119 14..535 CDD:273328 171/537 (32%)
MFS 163..525 CDD:119392 121/372 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 530..560 10/41 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 579..649
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843560
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.880

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