DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and Svop

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_081081.1 Gene:Svop / 68666 MGIID:1915916 Length:548 Species:Mus musculus


Alignment Length:461 Identity:116/461 - (25%)
Similarity:209/461 - (45%) Gaps:81/461 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 EWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAPEYFT 183
            ||.|   ..:..|...|:..:|::..|.::|.:||:||||..|..|::..:.:|:|:..||.|..
Mouse   114 EWRL---PSWQVALLTSVVFIGMMSSSTLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPVYSW 175

  Fly   184 YTFARLMVGATTSGV--FLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVH---DW 243
            ....|.:||....||  .:..|...:.|....|.:   :.:.:|:::|.:...:.|.||.   .|
Mouse   176 ILVLRGLVGFGIGGVPQSVTLYAEFLPMKARAKCI---LLIEVFWAIGTVFEVLLAVFVMPSLGW 237

  Fly   244 RWLQIALTLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLDEGE 308
            |||.:....|.|:|....:.:|||||:.:|.|.::.|||.:::.|..|...:   .|.:|:.  .
Mouse   238 RWLLLLSAAPLLLFAVLCFWLPESARYDVLSGNQEKAIATLKRIATENGAPM---PLGKLII--S 297

  Fly   309 NSEEKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNL--GGN 371
            ..|::.|.:               |||. |:.|..|||::..|...:..||||...|:.|  .|:
Mouse   298 RQEDRGKMR---------------DLFT-PHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGD 346

  Fly   372 V-------------------------LLNFVISGAVEIPAYIFLLLTLNRWGRRSILCGCLVMAG 411
            |                         .::.:.:...|.|..:..|..::|.||:..:..|.::..
Mouse   347 VCSISSRKKAVEAKCSLACEYLSKEDYMDLLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFIIFS 411

  Fly   412 L-SLLATVIIPQRMHTLIVACAMLGKLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGM 475
            | |||..:.|.:.:.||::   .:.:..|:..:...|:::.|.:||..|.:.||..|.:||:..:
Mouse   412 LCSLLLFICIGRNVLTLLL---FIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGAL 473

  Fly   476 MAPFLNFL---ATIWKPLPLLICGSLTLVAGLLSLLLPETHNKPMLETIADGERFGKKTKADVYL 537
            :.||:..:   ::::  |.|.:.....|:||:.|..||       :||      .|:..:...:.
Mouse   474 ITPFIAQVMLESSVY--LTLAVYSGCCLLAGVASCFLP-------IET------KGRALQESSHR 523

  Fly   538 ETGQEL 543
            |.|||:
Mouse   524 EWGQEM 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 109/436 (25%)
MFS 127..503 CDD:119392 101/411 (25%)
SvopNP_081081.1 2A0119 9..519 CDD:273328 112/449 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 521..548 4/9 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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