DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and Slc22a17

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_001347335.1 Gene:Slc22a17 / 59049 MGIID:1926225 Length:520 Species:Mus musculus


Alignment Length:528 Identity:136/528 - (25%)
Similarity:227/528 - (42%) Gaps:83/528 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 VFLLAKPDFRC---ALPFENGSSYDLPTHLWNLSYPENERCSYYDVDYTEEYLNGSIPRSSNETK 100
            :|.|| |...|   ||| .|.|.::.|        |.:...|...........:|.:   ::...
Mouse     6 IFTLA-PPLHCHYGALP-PNASGWEQP--------PNSSGVSVAGAALAASAASGVV---TSTDP 57

  Fly   101 TCSSYV------------YDRSKYL-NSAVTEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLS 152
            :||.:.            |:....| .:|:.:|:|||...:.......||:||...|.:..|..:
Mouse    58 SCSGFAPPDFNHCLKDWDYNGLPVLTTNAIGQWDLVCDLGWQVILEQILFILGFASGYLFLGYPA 122

  Fly   153 DKYGRKPILFASLVIQVLFGVLAGVAPEYFTYTFA-RLMVGATTSGVFLVAYVVAMEMVGPDKRL 216
            |::||:.|:..:|.:....|| .|.|....|...| |.::|...:||.|..|::.:|:..|.:||
Mouse   123 DRFGRRGIVLLTLGLVGPCGV-GGAAAGSSTGIMALRFLLGFLLAGVDLGVYLMRLELCDPTQRL 186

  Fly   217 YAGIFVMMFFSVGFMLTAVFAYFVHDWRWLQIALTLPGLIFMFYYW--IIPESARWLLLKGRKDC 279
            ...:...:....|..|....|....|||:||..:|.|.::|:||.|  :..||||||::|.:.:.
Mouse   187 RVALAGELVGVGGHFLFLGLALVSKDWRFLQRMITAPCILFLFYGWPGLFLESARWLIVKRQIEE 251

  Fly   280 AIANMQKAARFNKVEISDEALSELLDEGENSEEKAKQKLEDQELDEGPPPSVWDLFCYPNLRR-- 342
            |.:.::..|..|:            ..|:...|:|::.|  |||:...|......|.:.:|..  
Mouse   252 AQSVLRILAERNR------------PHGQMLGEEAQEAL--QELENTCPLPATSTFSFASLLNYR 302

  Fly   343 ---KTLLIFLDWLVTSGVYYGLSWNTSNLGGN------VLLNFVISGAVEIPAYIFLLLTLNRWG 398
               |.|||.   ..|:.:.:.:......:||.      .|.:.:.||...: |.:||.:|::|:|
Mouse   303 NIWKNLLIL---GFTNFIAHAIRHCYQPVGGGGSPSDFYLCSLLASGTAAL-ACVFLGVTVDRFG 363

  Fly   399 RRSILCGCLVMAGLSLLATVIIPQRMH-TLIVACAMLGKLAITASYGTVYIFSAEQFPTVVRNVA 462
            ||.||...:.:.|::.|..:.:...:: ..|...::||..:..||.....:.::|..||.||...
Mouse   364 RRGILLLSMTLTGIASLVLLGLWDYLNDAAITTFSVLGLFSSQASAILSTLLASEVIPTTVRGRG 428

  Fly   463 LGAASMVARISGMMAP----------FLNFLATIWKPLPLLICGSLTLVAGLLSLLLPETHNKPM 517
            ||....:..:.|:..|          ||..:.       |..|..|.:   |..:|||||..|.:
Mouse   429 LGLIMALGALGGLSCPAQRLHMGHGAFLQHVV-------LAACALLCI---LSIMLLPETKRKLL 483

  Fly   518 LETIADGE 525
            .|.:.|||
Mouse   484 PEVLRDGE 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 132/521 (25%)
MFS 127..503 CDD:119392 102/400 (26%)
Slc22a17NP_001347335.1 MFS_SLC22A17 63..476 CDD:341003 111/441 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843373
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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