DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orct2 and svopa

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:XP_005165254.1 Gene:svopa / 559162 ZFINID:ZDB-GENE-060526-336 Length:549 Species:Danio rerio


Alignment Length:476 Identity:121/476 - (25%)
Similarity:206/476 - (43%) Gaps:96/476 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 EWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAPEYFT 183
            ||.|   ..:..|...|:..:|:::.|.::|.:|||||||..|..|::..:.:|:|:..||.|..
Zfish   114 EWAL---PSWEVALLTSVVFIGMMISSSLWGNISDKYGRKTGLKMSVLWTLFYGILSAFAPIYGW 175

  Fly   184 YTFARLMVGATTSG----VFLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVH--- 241
            ..|.|.:||....|    |.|.|..:.|.     .|....:.:.:|:::|.:...:.|..|.   
Zfish   176 ILFLRALVGFGIGGAPQSVTLYAEFLPMR-----SRATCILLIEIFWALGTVFEVLLAILVMPTL 235

  Fly   242 DWRWLQIALTLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLDE 306
            .||||....|:|..||.|..:.:|||||:.:|.|.::.|:..:::.|..|.|.:   .|.:|:  
Zfish   236 GWRWLLALSTIPLFIFAFLCFWLPESARYDVLTGNQEKALNTLKRIAAENNVPM---PLGKLI-- 295

  Fly   307 GENSEEKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNL--- 368
                  .|:|:      |.|   .:.|||. |:.|..|:|::..|...:..|||:...|:.|   
Zfish   296 ------VARQE------DRG---KIQDLFS-PHFRWTTVLLWFIWFSNAFSYYGVVLLTTELFQE 344

  Fly   369 GGNVLLNFVISGA-----------------------------VEIPAYIFLLLTLNRWGRRSILC 404
            ||      |..||                             .|.|..:..|..::|.|||..:.
Zfish   345 GG------VCGGAKGSKMEPGCSLECKYLNSDDYKDLLWTTLSEFPGLLVTLWAIDRLGRRKTMA 403

  Fly   405 GCLVMAGLSLLATVIIPQRMHTLIVACAMLGKLAITASYGTVYIFSAEQFPTVVRNVALGAASMV 469
            .|..:..|.::.......|  |.:.....:.:..|...:...|:::.|.:||..|.:.||.:|.:
Zfish   404 LCFFVFSLCIVPLYSCVGR--TSLTVFIFIARAFIAGGFQAAYVYTPEVYPTATRALGLGTSSGM 466

  Fly   470 ARISGMMAPFLNFL---ATIWKPLPLLICGSLTLVAGLLSLLLPETHNKPMLETIADGERFGKKT 531
            ||:..::.||:..:   ::::..|.:..|  ..|:|.:.|..||       :||.      |:..
Zfish   467 ARVGALITPFVAQVMLESSVYLTLSVYCC--CCLLAAIASCALP-------IETT------GRGL 516

  Fly   532 KADVYLETGQEL--RAPEAQP 550
            :...:.|.|||:  ||.:..|
Zfish   517 QESSHREWGQEMMGRASDHSP 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 111/442 (25%)
MFS 127..503 CDD:119392 104/417 (25%)
svopaXP_005165254.1 2A0115 82..482 CDD:273327 104/404 (26%)
MFS 88..508 CDD:119392 109/432 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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