DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and slc22a13b

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:XP_017209322.1 Gene:slc22a13b / 556601 ZFINID:ZDB-GENE-061013-532 Length:549 Species:Danio rerio


Alignment Length:573 Identity:186/573 - (32%)
Similarity:293/573 - (51%) Gaps:60/573 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YDEAIIHLGDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALPFENGSSYDL------ 61
            :.:.:..:|:||.:||.:...:||.:|..|||....||.      ..:.|....||:.|      
Zfish     4 FTQILSSVGEFGAFQKRLLVAVCLPNIFTAFHMFGQVFT------AISFPHYCNSSWILRQAPNL 62

  Fly    62 -PTHLWNLSYP-----ENERCSYY-----DVDYTEEYLNGSIPRSSNETKTC-SSYVYDRSKYLN 114
             .....||:.|     :.|.|..:     |::..|.|       ..|.|.:| ..:||...|..:
Zfish    63 TEEKQLNLTVPLDSKGQYESCKMFTPVEMDIEDIEHY-------GINTTTSCIDGWVYKAPKDSS 120

  Fly   115 SAVTEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGVLAGVAP 179
            :.:||::|||.....:..|.|::|.|:|:|:::||.::|||||:.....||.:|.|.||....:|
Zfish   121 TLITEFDLVCENKVYSEASQSIYMAGLLVGALLFGPMADKYGRRFATLLSLFLQFLSGVGVAFSP 185

  Fly   180 EYFTYTFARLMVGATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGFMLTAVFAYFVHDWR 244
            ..:.|...|.:||.|.||:.:..:|:..|..|..||....|....||::|.||.:..||.:.:||
Zfish   186 NIYVYIALRFVVGTTISGISINTFVLGTEWCGSAKRALFTILSHCFFAIGLMLLSGVAYGIRNWR 250

  Fly   245 WLQIALTLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEISDEALSELLDEGEN 309
            .||:.|:.|..:|..||||:||||||||.:|:.|.|...:.||||.|..::|:..|.::  |.||
Zfish   251 VLQLVLSAPVGLFFIYYWILPESARWLLTQGKLDSAKREILKAARINGRKVSENLLDKM--EAEN 313

  Fly   310 SEEKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYGLSWNTSNLGGNVLL 374
            :.:.:               ::.|||....||::.|::...|.|||.||||:|.|..|.|.::.|
Zfish   314 TAKSS---------------TMIDLFRVGYLRKRALIMCYMWFVTSLVYYGVSLNVGNFGLDIYL 363

  Fly   375 NFVISGAVEIPAYIFLLLTLNRWGRRSILCGCLVMAGLSLLATVIIPQRMHTLIVACAMLGKLAI 439
            ..:|.|..|.||.:.....:.|:|||......|::.|.:.|....||.:...::...|::||.::
Zfish   364 TQLIFGMAEFPARLSCFPLIQRFGRRICQSVVLLLGGTACLIIPAIPAKYPIVVTVIAVIGKFSL 428

  Fly   440 TASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAPFLNFLATIWKPLPLLICGSLTLVAGL 504
            .||:..||:::||.:|||||...:|..||.||::|::||.:..|......:|::|.|||..|.|.
Zfish   429 AASFSIVYVYTAELYPTVVRQNGVGLNSMCARVAGILAPLIGLLDVYHHAIPMIIYGSLPFVGGA 493

  Fly   505 LSLLLPETHN------------KPMLETIADGERFGKKTKADVYLETGQELRA 545
            |:.|||||.|            :.|..|....||:|::...|....|.|:.::
Zfish   494 LTFLLPETLNTDLQDHTDIPADESMTVTEVKLERWGRRRGWDRERSTSQDFKS 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 179/538 (33%)
MFS 127..503 CDD:119392 134/375 (36%)
slc22a13bXP_017209322.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588683
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9N9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 374 1.000 Inparanoid score I2060
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 1 1.000 - - mtm6383
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.930

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