DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Orct2 and SLC22A17

DIOPT Version :9

Sequence 1:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_065105.3 Gene:SLC22A17 / 51310 HGNCID:23095 Length:649 Species:Homo sapiens


Alignment Length:601 Identity:147/601 - (24%)
Similarity:243/601 - (40%) Gaps:134/601 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDEAIIHLGDFGRYQKIIYFLICLTSIPVAFHKLA----GVFLLAKPDFRC---ALPFENGSS 58
            :.::..:..:|..|..|::...|.||   ||.|..|.    .:|.|| |...|   |.| .|.|.
Human    78 LSFEALLAQVGALGGGQQLQLGLCCL---PVLFVALGMASDPIFTLA-PPLHCHYGAFP-PNASG 137

  Fly    59 YDLPTHLWNLSY--------------------------PENERCSYYDVDYTEEYLNGSIPRSSN 97
            ::.|.:...:|.                          |:...| ..|.||     ||....::|
Human   138 WEQPPNASGVSVASAALAASAASRVATSTDPSCSGFAPPDFNHC-LKDWDY-----NGLPVLTTN 196

  Fly    98 ETKTCSSYVYDRSKYLNSAVTEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILF 162
                              |:.:|:|||...:.......||:||...|.:..|..:|::||:.|:.
Human   197 ------------------AIGQWDLVCDLGWQVILEQILFILGFASGYLFLGYPADRFGRRGIVL 243

  Fly   163 ASLVIQVLFGVLAGVAPEYFTYTFA-RLMVGATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMMFF 226
            .:|.:....|| .|.|....|...| |.::|...:||.|..|::.:|:..|.:||...:...:..
Human   244 LTLGLVGPCGV-GGAAAGSSTGVMALRFLLGFLLAGVDLGVYLMRLELCDPTQRLRVALAGELVG 307

  Fly   227 SVGFMLTAVFAYFVHDWRWLQIALTLPGLIFMFYYW--IIPESARWLLLKGRKDCAIANMQKAAR 289
            ..|..|....|....|||:||..:|.|.::|:||.|  :..||||||::|.:.:.|.:.::..|.
Human   308 VGGHFLFLGLALVSKDWRFLQRMITAPCILFLFYGWPGLFLESARWLIVKRQIEEAQSVLRILAE 372

  Fly   290 FNKVEISDEALSELLDEGENSEEKAKQKLEDQELDEGPPP-----SVWDLFCYPNLRRKTLLIFL 349
            .|:            ..|:...|:|::.|:|.| :..|.|     |...|..|.|:.:..|::..
Human   373 RNR------------PHGQMLGEEAQEALQDLE-NTCPLPATSSFSFASLLNYRNIWKNLLILGF 424

  Fly   350 DWLVTSGVYYGLSWNTSNLGGN------VLLNFVISGAVEIPAYIFLLLTLNRWGRRSILCGCLV 408
                |:.:.:.:......:||.      .|.:.:.||...: |.:||.:|::|:|||.||...:.
Human   425 ----TNFIAHAIRHCYQPVGGGGSPSDFYLCSLLASGTAAL-ACVFLGVTVDRFGRRGILLLSMT 484

  Fly   409 MAGLSLLATVIIPQRMHTL-------------------IVACAMLGKLAITASYGTVYIFSAEQF 454
            :.|::.|..:.:....|.:                   |...::||..:..|:.....:.:||..
Human   485 LTGIASLVLLGLWDCEHPIFPTVWAQQGNPNRDLNEAAITTFSVLGLFSSQAAAILSTLLAAEVI 549

  Fly   455 PTVVRNVALGAASMVARISGMMAP----------FLNFLATIWKPLPLLICGSLTLVAGLLSLLL 509
            ||.||...||....:..:.|:..|          ||..:.       |..|..|.:   |..:||
Human   550 PTTVRGRGLGLIMALGALGGLSGPAQRLHMGHGAFLQHVV-------LAACALLCI---LSIMLL 604

  Fly   510 PETHNKPMLETIADGE 525
            |||..|.:.|.:.|||
Human   605 PETKRKLLPEVLRDGE 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 143/584 (24%)
MFS 127..503 CDD:119392 102/418 (24%)
SLC22A17NP_065105.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165153302
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.940

Return to query results.
Submit another query.